Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1584 |
Symbol | holB |
ID | 5386014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1841094 |
End bp | 1842116 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640864565 |
Product | DNA polymerase III subunit delta' |
Protein accession | YP_001400561 |
Protein GI | 153947256 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000000282591 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTGGT ATCCGTGGCT TAACGGCCCT TACCGACAAC TGGTTGGGCA GCACAGTACC GGGCGCGGGC ACCATGCATT ACTGCTGCAT TCATTACCCG GTAATGGCGA AGACGCATTA ATTTATGCGC TGAGTCGTTG GCTAATGTGT CAGCAGCGGC AAGGTGAGAA GAGTTGTGGT GAATGCCATA GCTGCCGCTT GATGTTGGCA GGCAACCACC CCGATTGGTA TGTACTGACA CCGGAAAAAG GCAAAAGCAG TATCGGGGTT GAGTTGGTTC GCCAATTGAT TGATAAACTG TATTCCCATG CTCAGCAAGG CGGTGCAAAG GTGGTGTGGT TGCCACATGC CGAAGTGTTG ACCGATGCCG CGGCTAATGC CCTGCTAAAA ACGCTGGAAG AGCCTCCAGA GAAGACCTAT TTTCTGTTGG ATTGCCACCA ACCCGCCAGC TTGCTGGCTA CACTGCGTAG CCGCTGTTTT TATTGGTATC TGGCTTGCCC GGATACGGCT ATTTGTCTGC AATGGCTCAA TCTGCAATGG CGTAAGCGGC AGATCCCTGT GGAGCCCGTT GCGATGTTGG CGGCCCTGAA ATTGAGTGAA GGCGCACCGC TGGCGGCTGA GCGGTTGCTC CAACCAGAGC GCTGGAGTAT CCGCAGCGCT TTGTGTAGCG GGCTAAGCGA GGCGCTGAAC CGCTCAGACT TGCTGTCGTT GCTACCACAA CTTAACCATG ATGATGCTGC TGAACGTCTG CAATGGCTCT CTTCACTGCT CTTGGATGCG CTGAAGTGGC AGCAAGGGGC AGGGGAGTTT GCGGTTAATC AGGATCAATT GCCATTAGTG CAACAGTTGG CACACATCGC GGCCACGCCA GTATTACTTC AGTTAGCTAA GCAACTGGCT CATTGCCGCC ATCAATTATT ATCTGTGGTA GGTGTTAATC GTGAATTGTT ACTCACTGAG CAACTGCTTA ACTGGGAAAC AGCACTGTCC ACGGGTACTT ACTCCACCTT ACCTTCGTTG TAA
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Protein sequence | MNWYPWLNGP YRQLVGQHST GRGHHALLLH SLPGNGEDAL IYALSRWLMC QQRQGEKSCG ECHSCRLMLA GNHPDWYVLT PEKGKSSIGV ELVRQLIDKL YSHAQQGGAK VVWLPHAEVL TDAAANALLK TLEEPPEKTY FLLDCHQPAS LLATLRSRCF YWYLACPDTA ICLQWLNLQW RKRQIPVEPV AMLAALKLSE GAPLAAERLL QPERWSIRSA LCSGLSEALN RSDLLSLLPQ LNHDDAAERL QWLSSLLLDA LKWQQGAGEF AVNQDQLPLV QQLAHIAATP VLLQLAKQLA HCRHQLLSVV GVNRELLLTE QLLNWETALS TGTYSTLPSL
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