Gene YpsIP31758_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1584 
SymbolholB 
ID5386014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1841094 
End bp1842116 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content53% 
IMG OID640864565 
ProductDNA polymerase III subunit delta' 
Protein accessionYP_001400561 
Protein GI153947256 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000282591 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTGGT ATCCGTGGCT TAACGGCCCT TACCGACAAC TGGTTGGGCA GCACAGTACC 
GGGCGCGGGC ACCATGCATT ACTGCTGCAT TCATTACCCG GTAATGGCGA AGACGCATTA
ATTTATGCGC TGAGTCGTTG GCTAATGTGT CAGCAGCGGC AAGGTGAGAA GAGTTGTGGT
GAATGCCATA GCTGCCGCTT GATGTTGGCA GGCAACCACC CCGATTGGTA TGTACTGACA
CCGGAAAAAG GCAAAAGCAG TATCGGGGTT GAGTTGGTTC GCCAATTGAT TGATAAACTG
TATTCCCATG CTCAGCAAGG CGGTGCAAAG GTGGTGTGGT TGCCACATGC CGAAGTGTTG
ACCGATGCCG CGGCTAATGC CCTGCTAAAA ACGCTGGAAG AGCCTCCAGA GAAGACCTAT
TTTCTGTTGG ATTGCCACCA ACCCGCCAGC TTGCTGGCTA CACTGCGTAG CCGCTGTTTT
TATTGGTATC TGGCTTGCCC GGATACGGCT ATTTGTCTGC AATGGCTCAA TCTGCAATGG
CGTAAGCGGC AGATCCCTGT GGAGCCCGTT GCGATGTTGG CGGCCCTGAA ATTGAGTGAA
GGCGCACCGC TGGCGGCTGA GCGGTTGCTC CAACCAGAGC GCTGGAGTAT CCGCAGCGCT
TTGTGTAGCG GGCTAAGCGA GGCGCTGAAC CGCTCAGACT TGCTGTCGTT GCTACCACAA
CTTAACCATG ATGATGCTGC TGAACGTCTG CAATGGCTCT CTTCACTGCT CTTGGATGCG
CTGAAGTGGC AGCAAGGGGC AGGGGAGTTT GCGGTTAATC AGGATCAATT GCCATTAGTG
CAACAGTTGG CACACATCGC GGCCACGCCA GTATTACTTC AGTTAGCTAA GCAACTGGCT
CATTGCCGCC ATCAATTATT ATCTGTGGTA GGTGTTAATC GTGAATTGTT ACTCACTGAG
CAACTGCTTA ACTGGGAAAC AGCACTGTCC ACGGGTACTT ACTCCACCTT ACCTTCGTTG
TAA
 
Protein sequence
MNWYPWLNGP YRQLVGQHST GRGHHALLLH SLPGNGEDAL IYALSRWLMC QQRQGEKSCG 
ECHSCRLMLA GNHPDWYVLT PEKGKSSIGV ELVRQLIDKL YSHAQQGGAK VVWLPHAEVL
TDAAANALLK TLEEPPEKTY FLLDCHQPAS LLATLRSRCF YWYLACPDTA ICLQWLNLQW
RKRQIPVEPV AMLAALKLSE GAPLAAERLL QPERWSIRSA LCSGLSEALN RSDLLSLLPQ
LNHDDAAERL QWLSSLLLDA LKWQQGAGEF AVNQDQLPLV QQLAHIAATP VLLQLAKQLA
HCRHQLLSVV GVNRELLLTE QLLNWETALS TGTYSTLPSL