Gene YpsIP31758_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1583 
Symboltmk 
ID5388493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp1840456 
End bp1841094 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content54% 
IMG OID640864564 
Productthymidylate kinase 
Protein accessionYP_001400560 
Protein GI153946978 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000000000000489849 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGTA AATTTATCGT TATTGAAGGG CTTGAAGGAG CAGGGAAAAC CACAGCTCGA 
GACACTGTGG TCGCGGTGCT GCGTGCCCAA GGGATTAACG ATATCGTTTT TACCCGCGAG 
CCGGGGGGAA CCCCTTTGGC GGAAAAACTG CGTGATTTGA TTAAGCAAGG TATTGACGGT 
GAGGTCCTGA CGGATAAAGC CGAGGTATTA ATGCTGTATG CCGCCAGGGT GCAATTAGTA 
GAAAATGTCA TCAAGCCAGC ACTGGCGCGT GGCAGTTGGG TTGTGGGTGA CCGCCATGAT 
TTGTCATCAC AGGCATATCA GGGCGGGGGG CGAGGGATTG ACAGCCAACT GATGGCCTCG 
TTACGTGACA CGGTGTTAGG CGAATTCCGG CCAGACCTGA CCTTATATTT GGATCTGCCA 
CCGGCTGTGG GCTTGGCGCG CGCGCGCGCG CGCGGTGAAT TGGACCGTAT CGAACAAGAG 
TCACTGGCGT TTTTTGAGCG AACCCGCGCA CGTTACCTTG AATTGGCCGC CAGTGATGCC 
AGTATTAAAA CGATTGATGC CTCTCAGCCC ATTGAACAAG TTAGTGCGTC GATAAGCCAG 
GCGCTCGCTC AGTGGCTGAC CAATCAGGAA CTCGTGTAA
 
Protein sequence
MNSKFIVIEG LEGAGKTTAR DTVVAVLRAQ GINDIVFTRE PGGTPLAEKL RDLIKQGIDG 
EVLTDKAEVL MLYAARVQLV ENVIKPALAR GSWVVGDRHD LSSQAYQGGG RGIDSQLMAS 
LRDTVLGEFR PDLTLYLDLP PAVGLARARA RGELDRIEQE SLAFFERTRA RYLELAASDA 
SIKTIDASQP IEQVSASISQ ALAQWLTNQE LV