Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1576 |
Symbol | fabH |
ID | 5387957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1833765 |
End bp | 1834715 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640864557 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_001400553 |
Protein GI | 153949287 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 3.70406e-16 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATACTA AGATTCTCGG TACGGGGAGT TATCTGCCCG TACAAGTGCG CAGCAATGCT GATTTAGAAA AAATGGTGGA TACGTCAGAT GAGTGGATTG TCACTCGTAC TGGTATCCGT GAGCGGCGTA TTGCAGGCCT TGACGAAACA GTCGCGACTA TGGGCTTCCA GGCGGCAGAA AAAGCGCTGG AAATGGCCGG TATTGATAAG GACGATATCG GGTTGATTAT CGTTGCGACC ACCTCTTCAA GCCATGCTTT CCCAAGTTCG GCTTGCCAGG TGCAGCGAAT GCTCGGTATC AAAGATGCAG CTTCTTTTGA TTTGGCTGCG GCTTGCGCGG GTTTTACCTA TGCGCTGAGT GTTGCTGACC AGTATGTTAA GAGTGGTGCG GTCAAGCATG CCATTGTTAT TGGGTCAGAT GTATTGTCCC GTGCATTGGA TCCAGAAGAT CGTGGTACGA TCATTCTGTT TGGCGATGGC GCTGGCGCGG TGGTACTTGG TGCATCTGAG CAACCAGGTA TTATGTCTAC GCATTTACAT GCTGATGGTC GTTATGGCGA GTTGCTCGCT TTACCGTATC CAGACCGTCA GCAGGACCAA CCTGCCTACG TCACGATGGC AGGCAATGAA GTTTTTAAAG TTGCGGTAAC GGAACTGGCC CACATTGTGG ATGAAACATT GCAGGCTAAT AATCTGGATC GCACTGCGCT CGATTGGTTG GTGCCACATC AGGCTAACCT GCGTATTATT AGCGCTACGG CTAAAAAGTT AGGCATGGGG ATGGATAAAG TGGTGATCAC GCTTGATCGC CATGGGAACA CCTCCGCGGC ATCAGTGCCT TCGGCATTCG ATGAAGCAGT GCGAGATGGG CGAATTCAAC GTGGGCAGTT GGTATTGCTT GAGGCGTTTG GCGGTGGATT TACCTGGGGT TCTGCACTGG TTCGTTTTTG A
|
Protein sequence | MYTKILGTGS YLPVQVRSNA DLEKMVDTSD EWIVTRTGIR ERRIAGLDET VATMGFQAAE KALEMAGIDK DDIGLIIVAT TSSSHAFPSS ACQVQRMLGI KDAASFDLAA ACAGFTYALS VADQYVKSGA VKHAIVIGSD VLSRALDPED RGTIILFGDG AGAVVLGASE QPGIMSTHLH ADGRYGELLA LPYPDRQQDQ PAYVTMAGNE VFKVAVTELA HIVDETLQAN NLDRTALDWL VPHQANLRII SATAKKLGMG MDKVVITLDR HGNTSAASVP SAFDEAVRDG RIQRGQLVLL EAFGGGFTWG SALVRF
|
| |