Gene YpsIP31758_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1547 
Symbol 
ID5386470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1801729 
End bp1802466 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content33% 
IMG OID640864528 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001400524 
Protein GI153948985 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATTA ATTTTTTTGA TAATGAAAGC ATTAATGAAG ATATAAAAAA TTATATCCAA 
CGGAGGATAA AAGCCTATGG CAATATCCGC TATTCTTATT TGCTAATGAA TAAAAAAGTA
CCGCTACATC CGGCGATCAT ATCGAACTAC CCACTAGACT GGGTAAAAAA GTACAAGAAG
AATAGTTATC ACCTGATCGA CCCTGTGATT TTGACCGCCA AAGGCAAAGT CGCACCATTT
GCATGGGATG ACAATTCAGT CATCAATATA AAATCAACTG ATTCGGCCGT GTTCAATCTC
GCCAGAGAAT ATAATATTGT TAATGGTTAT ACCTTCGTTC TTCATGATAA TAACAATAAT
ATGGCGACCT TGAATGTTTC AAGTGGCGAT GATGATAGTA TTTTTTTCGA TGAAAGCATC
GAGGTGAACA AAGAAAAAAT ACAAATGTTA CTTATTTTTA TTCACGATAA AATGCTTGGT
CTATATAATA AAAGTCATCA TGAAAACAAC ACGTTGAATA AAAAAGAGAA TAAAAGAGAA
ATTTTCTCTC CTCGGGAAAA TGAAATTCTG TACTGGGCCA GTGTAGGAAA GACTTACTCT
GAAATTGCGA TAATTTTAGG TATTAAGAAA AGCACAGTGA AATTTCATAT TGGTAATATT
GTTAGGAAGT TAGGTGTTCT CAATGCCAAA CATGCAATAA GACTTGGCAT TGAGTTACAA
TTGATCAAAC CTATTTAG
 
Protein sequence
MIINFFDNES INEDIKNYIQ RRIKAYGNIR YSYLLMNKKV PLHPAIISNY PLDWVKKYKK 
NSYHLIDPVI LTAKGKVAPF AWDDNSVINI KSTDSAVFNL AREYNIVNGY TFVLHDNNNN
MATLNVSSGD DDSIFFDESI EVNKEKIQML LIFIHDKMLG LYNKSHHENN TLNKKENKRE
IFSPRENEIL YWASVGKTYS EIAIILGIKK STVKFHIGNI VRKLGVLNAK HAIRLGIELQ
LIKPI