Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1545 |
Symbol | |
ID | 5386807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1800317 |
End bp | 1801243 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640864526 |
Product | LysR family substrate binding transcriptional regulator |
Protein accession | YP_001400522 |
Protein GI | 153949668 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAC TCCCATCACT CCGTATGTTG CGTGTGTTTG AAGAGGCCTG CCACACGCTG AGTTTCAGTA AAGCAGCGGA GGCGTTATTT ATGACGCAAA GCGCCGCCAG TCGTCAGATT AAGCAACTGG AAAATTTTCT GGGGAAATCG CTATTTATAC GCGGACACAG AGGGTTAGAG TTGACCCAAG ATGCGATGAC TATGTTACCT ATCGTCAGAC AGTCGTTGGA TTTACTGGAG GAGGGGGTGA AACATGTCCA GTTAAGTAAT CCACTGCAAC ATCTGCGCTT ACAGGTCGCG CCGACATTTG CCACCCGCTG GTTGGCCCCC CGGTTGGTTA CGTTACTGCA ACGTAATAGT CAGCTACAAA TTGCCCTGAT CAGTGAGATT CGTCAGAAGT ATTGTGATTT TGACAGCGCG ATCCGCTTTG GTGATATTCG TCGGGACCTG TCGAATGGGC ACCTGCTCTG CTACGAACAG CTCTGTTTAG TCGCCAGCCC TCTGGTGATG CAACAGGGGC GTTTTCCCCC ACTGACCGCT TTACCACAGT TGCATATTCT TAATGGTGAT AGTCGTCTGA CAAACTGGCA GCAATGGCTG GATGCGGCAC AGATAACCGT AGCCGCAGGG CATAACGCGC TTGAGTTCAG TACTCAAGAC CAGGTGATCA GTGCCTGCAC TACTGGTGCC GGTTACGCAG TGTTAGATAT TCTGATGATT AGCCATGAAC TGGATAATGG GTTATTGAGA CAGGTTTTGC CGCTGACGGT GACCAGCACT CATGGCTACT GGCTAGAGAT CCCACAGGAT AAAGGCCATT CGCCAAGGGT GATTATTTTT CAGGAGTGGT TACAGCGGGA GTTGAAGCGT GATATTGCCA AGCGCTACTC AAAAGGGGAA GCCAAACCTC TACCGGCTGT GCTTTAG
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Protein sequence | MRKLPSLRML RVFEEACHTL SFSKAAEALF MTQSAASRQI KQLENFLGKS LFIRGHRGLE LTQDAMTMLP IVRQSLDLLE EGVKHVQLSN PLQHLRLQVA PTFATRWLAP RLVTLLQRNS QLQIALISEI RQKYCDFDSA IRFGDIRRDL SNGHLLCYEQ LCLVASPLVM QQGRFPPLTA LPQLHILNGD SRLTNWQQWL DAAQITVAAG HNALEFSTQD QVISACTTGA GYAVLDILMI SHELDNGLLR QVLPLTVTST HGYWLEIPQD KGHSPRVIIF QEWLQRELKR DIAKRYSKGE AKPLPAVL
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