Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1534 |
Symbol | |
ID | 5384472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1785139 |
End bp | 1786383 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640864516 |
Product | small conductance mechanosensitive ion channel (MscS) family protein |
Protein accession | YP_001400512 |
Protein GI | 153947362 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAA GAATAAGCCA GTGGCTGGAA AGATTGGGGA TGGAGTTCTC CGATGTGATG TCATTGACGA TGGTGATTGG GCTAATATTA TTGATTTCTG TGGTGATCCA TCTGGTGCTA CACCGTGTAG TTCTGGCCGC CCTCCAGCGC CGTGGGCAGC AATCGCAACG CATCTGGCAA CAGGCCATCA CAAAACACAA ACTGTTCCAA CGCGTAGCGC TACTGCTGCA AGGGATCATC ATCAATCTCC AGGCCGTACT GTGGTTGCAA AACGGCAGCC AGACGCAGGC AGTTATCGTT ACCGCCGCGC AGGTGTGGAT TATGGCCTTC GCCCTGCTGG CTCTATTTTC TTTACTTGAT ACCTTGCTAG CCCTGCTCCG CCAGAGTTCA GTTGCTCATC AATTACCCCT GCGCGGTATC TGCCAAGGGC TGAAACTGGT GGCTGCGATA TTTATCGGCA TCATGATCGT TTCGCTGTTG ATGGGCCGAT CACCCCTGTT GCTACTCAGC GGCTTAGGGG CCATGACGGC AGTACTGATG TTGGTGTTCA AAGACCCAAT CCTTGGTCTG GTGGCCGGTA TTCAGCTCTC TGCTAACGAT ATGCTAAAAA TTGGCGATTG GCTGGAAATG CCAAAATATG GGGCTGATGG CGCAGTGACC GATATTGGCC TGACTACAGT AAAAGTAAGA AATTGGGATA ACACCGTCAC GACCATCCCA ACTTATGCGC TTATTTCCGA TTCCTTCAAG AACTGGCGCT CAATGTCGGA ATCCGGTGGC CGACGTATAA AACGCAGCAT CAATATTGAT ACCACCAGCG TACATTTTCT GTCAGAACAG GAACAACAGC GCCTCACCCT CAACCCGCTG TTACAACACT ACCTTAGTGA AAAATCGCAG GAACTGAACC AATATAATCA GCAGATAGCC CTCGACCTCA GTTCACCACT CAATGGCCGC CGCCTGACTA ACATTGGAAC GTTGCGCGCC TATCTGGTGG CTTATCTGCG GGCACATCTG GGGATCCATC AGTCGATGAC ATTAATGGTG CGCCAACTTG CCCCAACACC CGAGGGCTTG CCGCTAGAAG TTTATGCTTT TACCAACACC ACGATATGGG CAGAATACGA AGGTATTCAG GCAGATATTT TTGACCACAT CTTTGCCGTG GTGAGTGAGT TTGATCTGCG AATCCACCAA ACACCAAGCG GTAACGATAT GCGCAGTATG CTTGCCAAAG TCTAA
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Protein sequence | MQQRISQWLE RLGMEFSDVM SLTMVIGLIL LISVVIHLVL HRVVLAALQR RGQQSQRIWQ QAITKHKLFQ RVALLLQGII INLQAVLWLQ NGSQTQAVIV TAAQVWIMAF ALLALFSLLD TLLALLRQSS VAHQLPLRGI CQGLKLVAAI FIGIMIVSLL MGRSPLLLLS GLGAMTAVLM LVFKDPILGL VAGIQLSAND MLKIGDWLEM PKYGADGAVT DIGLTTVKVR NWDNTVTTIP TYALISDSFK NWRSMSESGG RRIKRSINID TTSVHFLSEQ EQQRLTLNPL LQHYLSEKSQ ELNQYNQQIA LDLSSPLNGR RLTNIGTLRA YLVAYLRAHL GIHQSMTLMV RQLAPTPEGL PLEVYAFTNT TIWAEYEGIQ ADIFDHIFAV VSEFDLRIHQ TPSGNDMRSM LAKV
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