Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1518 |
Symbol | |
ID | 5387671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1760564 |
End bp | 1762252 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640864500 |
Product | ShlB/FhaC/HecB family haemolysin secretion/activation protein |
Protein accession | YP_001400496 |
Protein GI | 153950807 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGTTATT GTTATTTTAT ATTACACACG GCTATATTAT TTCCACTGTT GGTTATTTCT CGCGCCGGAC AGAGTGCGGA ATTAACGCCT ATTCAACAGC AAACTCTCCA TCAGCAAGAG CGGCAGCGGG CGCTGGAAGA ACGTCTGGCT CCGCCGACGC CAGATGTGCG CTTATCTGCA CCTTCGGCCT CTTCGGATCG CCTTATTTTC CCTGTGGAAA AGCCCTGCTT TGTTATTGAC CGCGTCACAC TCAGCGGCAC TGAACCGTTA CCCCGTTGGT TGCCGTTACA GCGTATTGCT AATCAGGCTC TAGGTCAGTG TTTGGGCGGG CAGGGGATTA ACCAACTGAT GAGCCAATTA CAAAACCGTT TAGTGGGTCA TGGTTATGTG ACGACCCGGG TGCTTGCTCC GCAGCAGGAT TTGAACAGCG GCACACTGGC GTTACAAGTG GTGCCCGGCA AAATACACCG CGTGGCGCTG ACACCAGAGA GTGACCGCCA TGTCACGCTG TTCAGTGCCT TTCCCGCACG CCCCGGTCAC TTATTGGATC TGCGTGATAT TGAGCAAGGG CTGGAGAATC TTCAACGTAT CCCCACAGTG CAAGCCAGCA TGGAATTGAT CCCCGGCAGC GCGCCCGGAG AGACCGATAT CGCCCTAAGC TGGAAGCAGA GCAAAATGTG GCGTTTGGCC GCCTCACTGG ATGACTCTGG GACTCGCAGT ACTGGCCGTT ATCAGGGCGG TGCGACGCTG TTTCTGGATA ACCCATTCTC TTTGAGTGAC CAGTTTTATG TCTCGGCGGG TGGCTCAATA AAAAATCGCG GCGATAAAGG CACCAATAAC CTGACTGGCC ACTACTCATT GCCGTTCGGT TACTGGACAG CCGGCATAAC CGCCAGCAGT TATGATTATC ACCAGACAGT GGCGGGCCTG AATAGCGATT ACAACTATCG GGGCGAAAGT GAAAATGTGT CATTGCAACT CAGCCGCCTG TTGCACCGCA ATGCCAGCCA AAAAACCACA CTCACCTACG ATGTCCTGAC CCGTTCGTCG AAAAACTACA TCAATGATAC CGAAGTTGAG GTTCAACGCC GCCGCACATC TGCCTGGCGC ATAGGGCTGC AACATCGCCA CTTTATTTCG CAGGCCACGC TGGATGCCGG GGTGAGTTAT CAGCGCGGTA CCCGTTGGTT TGGGGCGGTT CCGGCTCAAG AAGAATATTT TGATGAAGGC ACGGCGTTAA GCAAGATTCT GCAATTGAAT GCACAACTGG ATATTCCCTT CTCGGTGATG GCGCAAAATT TCCATTACAA CGTGCAATAC CAGCGTCAGA GCAGCAGCAC CCCGTTGACC CCACAGGATC AATTCAGCAT CGGTGGCCGT TGGTCAGTGC GCGGCTTTAA TGGGGAGCGG ACCCTCAGTG CTGATCGTGG CTGGACGGTG CGTAATGATC TGGGTTGGTA CACACCGATA CAGGGGCAAG AGATCTATGT CGGCCTTGAT TATGGCGAAG TGGGTGGCCG CGGAAGCGCT TATCTGCTGG GTAACCATCT GGCGGGTGCC GCTGTCGGTA TTCGCGGCAA CGTACTCAAT ACCCGCTATG ACCTGTTTGC CGGCAAACCC CTGTCTGAAC CCGATGGCTT CCAATCCGAT GCCGTGACCG TGGGCTTTAA CCTGAACTGG CAATACTAA
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Protein sequence | MRYCYFILHT AILFPLLVIS RAGQSAELTP IQQQTLHQQE RQRALEERLA PPTPDVRLSA PSASSDRLIF PVEKPCFVID RVTLSGTEPL PRWLPLQRIA NQALGQCLGG QGINQLMSQL QNRLVGHGYV TTRVLAPQQD LNSGTLALQV VPGKIHRVAL TPESDRHVTL FSAFPARPGH LLDLRDIEQG LENLQRIPTV QASMELIPGS APGETDIALS WKQSKMWRLA ASLDDSGTRS TGRYQGGATL FLDNPFSLSD QFYVSAGGSI KNRGDKGTNN LTGHYSLPFG YWTAGITASS YDYHQTVAGL NSDYNYRGES ENVSLQLSRL LHRNASQKTT LTYDVLTRSS KNYINDTEVE VQRRRTSAWR IGLQHRHFIS QATLDAGVSY QRGTRWFGAV PAQEEYFDEG TALSKILQLN AQLDIPFSVM AQNFHYNVQY QRQSSSTPLT PQDQFSIGGR WSVRGFNGER TLSADRGWTV RNDLGWYTPI QGQEIYVGLD YGEVGGRGSA YLLGNHLAGA AVGIRGNVLN TRYDLFAGKP LSEPDGFQSD AVTVGFNLNW QY
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