Gene YpsIP31758_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1512 
Symbol 
ID5387646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp1754249 
End bp1755334 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content49% 
IMG OID640864494 
Producttartrate dehydrogenase 
Protein accessionYP_001400490 
Protein GI153949207 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR02089] tartrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA CCTACCGAAT TGCCGCCATA CCCGGGGACG GTATCGGCCA TGAAGTGATG 
CCAGAAGGGA TCAACGTGCT CCAGGCCGCC GCTTTGCGCT GGGATTTAGA TATTTCATTT 
GAAAATATTG AATGGGCAAG TTGTGAATAT TATCAACACC ATGGGCAGAT GATGCCGAAT 
GATTGGCAGA GGCAGCTACA ATGCTTCGAT GCGATTTATT TTGGTGCGGT TGGCTGGCCT 
GCGACCGTGC CAGACCACAT TTCGCTGTGG GGGTCGCTGT TGAAGTTTCG TCGTGATTTT 
CAGCAGTATG TCAATTTACG TCCGGTGCGC TTGTTTCCTG GCATACCCTG CCCGTTAGTG 
GGTAAACAGC CCGGTGATAT TGATTTTTAT GTGGTTCGGG AAAATACCGA AGGTGAATAT 
TCATCGGTTG GCGGGCGTTT GTTTGAAGGT ACCGAACAGG AAATGGTTTT ACAGGCGTCG 
ATATTCACAC GCCGTGGCGT TGACCGTATT CTAAAATACG CCTTTGAATT GGCGCAGATG 
CGCCCACGTA AGCGCCTGAC GTCTGCCACT AAATCTAATG GTCTGGCGTT CAGTATGCCG 
TACTGGGATG AGCGCTTCGA AGTGATGGCG GCGCAGTATC CACAAATTAG CGCGGACAAA 
CAGCATATTG ATATTTTGTG CGCCCGTTTT GTATTGAATC CTGAACGTTT TGATGTGGTT 
GTGGCATCTA ACTTATTTGG TGATATTTTA TCTGACCTTG GCCCGGCGTG TGCGGGGACG 
ATTGGCATTG CGCCTTCAGC GAACCTCAAT CCAGAGCGTG ACTTCCCTTC ACTGTTCGAA 
CCGGTACATG GCTCGGCCCC AGACATTTAT AAAAGAAATA TCGCTAACCC TATTGCGATG 
ATCTGGGCGG GGGCGATGAT GCTCGATTTT CTGGGGCAAG GAGATGAGCG CTATCATGCT 
GCCCATAATG GAATATTAAA CGCTATTGAA CAGGTGATTG CGCAAGGCCC TAAAACGCCT 
GATATGTGTG GTGATGCCTC CACCCAACAA GTGGGTTCTG CCATTGTGCA GGTCTTATCT 
CACTAA
 
Protein sequence
MKKTYRIAAI PGDGIGHEVM PEGINVLQAA ALRWDLDISF ENIEWASCEY YQHHGQMMPN 
DWQRQLQCFD AIYFGAVGWP ATVPDHISLW GSLLKFRRDF QQYVNLRPVR LFPGIPCPLV 
GKQPGDIDFY VVRENTEGEY SSVGGRLFEG TEQEMVLQAS IFTRRGVDRI LKYAFELAQM 
RPRKRLTSAT KSNGLAFSMP YWDERFEVMA AQYPQISADK QHIDILCARF VLNPERFDVV 
VASNLFGDIL SDLGPACAGT IGIAPSANLN PERDFPSLFE PVHGSAPDIY KRNIANPIAM 
IWAGAMMLDF LGQGDERYHA AHNGILNAIE QVIAQGPKTP DMCGDASTQQ VGSAIVQVLS 
H