Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1495 |
Symbol | glnH |
ID | 5386416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1736594 |
End bp | 1737337 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640864477 |
Product | glutamine ABC transporter periplasmic protein |
Protein accession | YP_001400473 |
Protein GI | 153948725 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.000566563 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCAC TTGTCAAAGT TTCATTGGCC GCACTGACAC TGGCCTTTGC TGTTAGCGCC TACGCCGCAG AAAAAGAGTT AATTGTTGCT ACAGACACCG CTTTCGTCCC ATTTGAATTC AAACAAGGGG ATAAATACGT TGGTTTTGAT ATCGATTTGT GGGATGCCAT CGCGAAAAAA CTGGATCTGA AGTACACGCT AAAACCAATG GATTTCAGCG GTATCATTCC GGCGCTGCAA ACGAAGAATG TCGATCTTGC ACTGGCGGGC ATTACTATCA CCGATGAGCG TAAAAAAGCC GTTGATTTTT CTGATGGTTA TTACAACAGT GGCCTCTTGG TCATGGTAAA AGCGGATAAT AATGACATTA AAAGTGAGGC CGACCTGCAA GGCAAAGTGT TAGCAGTAAA AAGCGGCACT GGCTCGGTGG ATTACGCCAA AGCCAATATC AAGACCAAAG ACTTGCGCCA ATTCCCGAAT ATCGATAACG CCTACCTGGA ATTAGGAACT GGCCGTGCAG ATGCGGTTTT ACATGATACG CCGAATATTC TTTACTTCAT CAAAACCGCA GGTAATGGCC AGTTCAAAGC AGTAGGTGAG TCGATTAAAG CTCAGCAGTA CGGTGTTGCA TTCCCGCAAG GCAGTGACCT GCGTGAAAAA GTTAACGCGG CACTGAAATC TCTGAAAGAA GACGGCACTT ACGCTGAAAT CTATAAAAAA TGGTTCGGCG TAGAACCTAA GTAA
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Protein sequence | MKSLVKVSLA ALTLAFAVSA YAAEKELIVA TDTAFVPFEF KQGDKYVGFD IDLWDAIAKK LDLKYTLKPM DFSGIIPALQ TKNVDLALAG ITITDERKKA VDFSDGYYNS GLLVMVKADN NDIKSEADLQ GKVLAVKSGT GSVDYAKANI KTKDLRQFPN IDNAYLELGT GRADAVLHDT PNILYFIKTA GNGQFKAVGE SIKAQQYGVA FPQGSDLREK VNAALKSLKE DGTYAEIYKK WFGVEPK
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