| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1485 |
|---|
| Symbol | menC |
|---|
| ID | 5388010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1727516 |
|---|
| End bp | 1728487 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640864467 |
|---|
| Product | O-succinylbenzoate synthase |
|---|
| Protein accession | YP_001400463 |
|---|
| Protein GI | 153948854 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1441] O-succinylbenzoate synthase |
|---|
| TIGRFAM ID | [TIGR01927] o-succinylbenzoic acid (OSB) synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACGG CTACCCTTTA CCGCTACAGT GTACCGATGG AAGCGGGGGT GATACTGCGC
CATCAGCGGC TGAAAAGTCG CGATGGGTTG CTGGTCAAAT TACAGCAAGG TGAATTGAGC
GGCTGGGGCG AAATTGCCCC GTTACCGGAA TTCAGTCAAG AAACACTGGA TCAAGCCCAA
GTGGCGGCAG AGTGTTGGCT GCAACACTGG GTCAGTGGTG TCGAATCGGA TGACAGCGTG
TTGCCCTCCG TGGCTTTTGG TCTCAGTTGT GCGCAGGCCG AACTCAACCA AACCTTACCG
CTGTCAGCGG ATTATCGCAA AGCGCCACTG TGTACCGGCG ATCCTGATGA GCTGTTTGCG
GTACTCCAGG CATTGCCGGG TGAGAAGGTT GCCAAGGTGA AGGTCGGGCT GTATGAAGCG
GTGCGTGATG GCATGATCGT TAATGTTCTG TTGGAAGCCC TGCCTGATCT GACACTGCGG
CTGGACGCCA ATCGCAGTTG GAGCCGAGCG AAGGCCGATG GGTTCGCGAA GTATGTCAAT
CCGGCGCTGC GTTCGCGTAT TGCCTTTCTG GAGGAACCGT GCAAAACCCG CGCTGAATCC
CGTGAGTTTG CTCAAGATAC CGGTATTGCT ATTGCCTGGG ATGAAAGTGT GCGTGAGGCG
GATTTTCAGG TTGAAGCCGA GCCGGGAGTG GCGGCAATTG TGATCAAACC AACGCTGGTG
GGCAGTCTTT CTCGCTGTCA GCAACTGGTG CAACAAGCGC ATCAGGCCGG TTTGGTTGCG
GTTATTAGCT CCAGTATTGA ATCCAGTCTG GGTCTGACGC AATTGGCCCG TTTGGCCGCT
TGGTTGACCC CCGCCACGGT TCCGGGGTTG GATACGCTGG ACCTGATGCA GGCGCAAGTC
GTGCGGCCGT GGCCAGACAG CCCGTTGCCG CTAATCACGA CCGAGCAGTT GGGCGTGGTA
TGGCATCGTT AG
|
|---|
| Protein sequence | MRTATLYRYS VPMEAGVILR HQRLKSRDGL LVKLQQGELS GWGEIAPLPE FSQETLDQAQ
VAAECWLQHW VSGVESDDSV LPSVAFGLSC AQAELNQTLP LSADYRKAPL CTGDPDELFA
VLQALPGEKV AKVKVGLYEA VRDGMIVNVL LEALPDLTLR LDANRSWSRA KADGFAKYVN
PALRSRIAFL EEPCKTRAES REFAQDTGIA IAWDESVREA DFQVEAEPGV AAIVIKPTLV
GSLSRCQQLV QQAHQAGLVA VISSSIESSL GLTQLARLAA WLTPATVPGL DTLDLMQAQV
VRPWPDSPLP LITTEQLGVV WHR
|
|---|
| |