| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1481 |
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| Symbol | menF |
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| ID | 5386622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1722532 |
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| End bp | 1723899 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640864463 |
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| Product | menaquinone-specific isochorismate synthase |
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| Protein accession | YP_001400459 |
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| Protein GI | 153948373 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACAAC TTTCTGGTTT GCTGGGTGAA TTACGACAGA AATTATGTGC CGGTTTCCCT
GAACAGGCAG GTATTCAACA ACTTATTTTT CCAGCACCCG GCTTGGTGGG CCGCCAATTG
TTAGAGTGGT TAACTGCTCA GACTCACTTT CCTCAATTTT ATTGGCGTCA CCGTGACAAC
CATGAAGAAG CCGCCGTCTG CGGGCAAACC CGCTCATTTG CCGATATGAA AGATGCCGAT
GATTTTATTC AGCAAAACCC TGATGCTAAT GGGCTGCGTA TTTGGGGCCT CAATGCATTT
GAACCGGTGA TGGTATTCGG GAAACTAACA GATAATGGCC TGGTCAGTGG AAAAAACGCC
CAAGCCAGCT TTCTTTTTCT ACCGCGTCTT GAAATATTAC GCCGGGGTAA AAAAACCTCG
CTCACCCTTA ATTTGAGCAG CGAGACCTCC CTACAGAAAG ATGCCTTACA GGCCATCACG
TTTATTGACC AATTGATGGC AGCCCGCGCT CTACCTGTGT TGAATGTGCG TATTCAGCAC
GCGAGTCATA CACCGGGATA TCCGCAATGG CGCAATCTGA TACAGCAAGC GCTAAATGAT
ATTGAGCAGC AAAAGCTCGA CAAAGTGGTA CTGGCACGGA CCACGACGTT GACGCTGAAT
AAACCGCTTT CGTGCGCTGC ATTTATGGCT GCCAGCCGGC AGGTCAATCA CCGTTGTTAT
CACTTTATGT TACGTTTTGA TGATCGACAG GCCTTTCTGG GTTCCAGTCC CGAACGGCTC
TATCTACGCC AGCAATTACA TTTAGAAACC GAAGCATTGG CGGGGACTGT CTCTAATCTT
GATAGCGACC CACAGGCGGC GGTATTGGCA GATTGGTTGA TGCATGATGA AAAGAATCAG
CGCGAGAATT TATTGGTGGT AGACGATATT TGTCAGCGCT TGCAAGGTGG GGTAACCGCC
GTGGATGTCA TGCCGCCAGA AATTATCCGC TTGCGCAAAG TACAGCATTT GCGCCGCCGT
ATCTGTGCGC AACTCAGCCG GGCCAGTGAT ACTGACTGCC TGCAACGCTT GCAGCCGACT
GCGGCGGTGG CGGGGTTGCC CCGTGAGGCG GCGCGGCAGT TTATTGCCAA ACATGAGCTA
TTTTCCCGTG GCTGGTATGC GGGTTCTGCC GGTTATTTGT CACTTAAACG CACTGAATTC
AGTGTGGCCC TGCGTTCAGC GCGAGTCGAT GGGCAGCAGA TTCACCTGTA TGCCGGGGCG
GGGATCGTGG CCGGTTCTGA TGCGGAACAA GAGTGGCAAG AGATCGATAA TAAGTCAGCA
GGTTTACAAA GCTTGTTGGA GCACGAAGCG CAGCCCGTTA AAGCCTAA
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| Protein sequence | MKQLSGLLGE LRQKLCAGFP EQAGIQQLIF PAPGLVGRQL LEWLTAQTHF PQFYWRHRDN
HEEAAVCGQT RSFADMKDAD DFIQQNPDAN GLRIWGLNAF EPVMVFGKLT DNGLVSGKNA
QASFLFLPRL EILRRGKKTS LTLNLSSETS LQKDALQAIT FIDQLMAARA LPVLNVRIQH
ASHTPGYPQW RNLIQQALND IEQQKLDKVV LARTTTLTLN KPLSCAAFMA ASRQVNHRCY
HFMLRFDDRQ AFLGSSPERL YLRQQLHLET EALAGTVSNL DSDPQAAVLA DWLMHDEKNQ
RENLLVVDDI CQRLQGGVTA VDVMPPEIIR LRKVQHLRRR ICAQLSRASD TDCLQRLQPT
AAVAGLPREA ARQFIAKHEL FSRGWYAGSA GYLSLKRTEF SVALRSARVD GQQIHLYAGA
GIVAGSDAEQ EWQEIDNKSA GLQSLLEHEA QPVKA
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