| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1462 |
|---|
| Symbol | nuoJ |
|---|
| ID | 5384808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1702804 |
|---|
| End bp | 1703349 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640864444 |
|---|
| Product | NADH dehydrogenase subunit J |
|---|
| Protein accession | YP_001400440 |
|---|
| Protein GI | 153949644 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTG CGTTTTATAT TGCAGCATTG GTGGCCGTGG TGGCGACGAT CCGCGTTATC
ACTCACACCA ACCCGGTACA TGCGTTGCTG TACCTGATTA TCTCTTTGTT GGCTATTTCG
GCGGTGTTCT TCTCGTTGGG GGCTTATTTT GCCGGTGCGC TGGAAATCAT CGTTTACGCG
GGTGCCATTA TGGTGCTGTT CGTGTTTGTG GTGATGATGC TGAACCTGGG CAACGTCGAG
CAACAAGAGC GTGCCTGGCT GAAACCCAGT ATGTGGATAG GCCCCGGTTT ACTCGCTCTG
GTTCTGCTAT CAGTACTGAT CTATGCCATT AGCTCTGTCT CTGATCAGGG TATCAGCGGT
GAAATGGTGG ATGCCAAAGC CGTTGGGATC AGCTTATTTG GCCCTTATGT GTTGGCGGTT
GAGCTGGCGT CAATGTTGCT GTTGGCCGGT TTAGTGGTGG CGTTCCATAT CGGGCGTGAA
CATAAGCCGG GTGACGTGAT GGGTGCGAGT GATTCAGCGA AAAGAAAAAC GGAGGAACAA
GCATGA
|
|---|
| Protein sequence | MEFAFYIAAL VAVVATIRVI THTNPVHALL YLIISLLAIS AVFFSLGAYF AGALEIIVYA
GAIMVLFVFV VMMLNLGNVE QQERAWLKPS MWIGPGLLAL VLLSVLIYAI SSVSDQGISG
EMVDAKAVGI SLFGPYVLAV ELASMLLLAG LVVAFHIGRE HKPGDVMGAS DSAKRKTEEQ
A
|
|---|
| |