| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1447 |
|---|
| Symbol | |
|---|
| ID | 5386105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1686288 |
|---|
| End bp | 1688120 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640864430 |
|---|
| Product | citrate transporter family protein |
|---|
| Protein accession | YP_001400426 |
|---|
| Protein GI | 153950305 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACAGCG AACTACTGTG GGTGTTGACG CTACTGCTGA TAGCTATTGT GCTGTTTACC
ACGAATAAAC TGCGAATGGA TGTCGTCGCG TTGTTGGTGA TTATTGCCTT TGTGATGAGT
GGAACATTGT CATTATCTGA GGCTACCAGT GGGTTCAGTG ATCCCAATGT TATCTTGATT
GCTGCGTTGT TTGTGATTGG TGAAGGGTTA GTCAGGACTG GTGTCGCCTA CCAAATGGGT
GATTGGTTGG TGAAAGTGGC CGGCCACAGT GAAACAAAAA TGTTAGCGTT GCTAATGGTT
ACCGTCGCCG GATTGGGTGC CTTTATGAGT TCAACTGGCG TCGTGGCGAT TTTTATTCCA
GTGGTACTGA GTGTGGCTAG CCGGATGAAA ATCTCACCGG GCCGTTTGAT GATGCCACTG
AGTTTTGCCG GTTTAATCAG CGGCATGATG ACTCTGGTAG CAACCCCGCC CAATATGGTG
GTCAACAGTG AATTAGTGCG CGAAGGGATC AAAGGGTTCG GGTTCTTCGG CGTGACACCA
ATTGGCATTA TCATTTTGTT CATGGGCGTG GCTTACATGT TAGTTGCCCG GCGCTGGCTG
GGGGGCAAAC AAGAACACAC TGAGAAAGAT CAATGGAAGC GGCGTACCTT CCGTGATCTG
ATTCGCGATT ATAAGCTGAC CGGTCGTGCC CGTCGTCTGG CTATTCGTCA TGGCTCCCCA
TTGATTGGTC GTTCACTCGA TGAATTGCAT CTGCGCGCCC GTTATGGCGC GAATGTAGTG
GGTATTGAAC GGTGGCGGCG TTTTCGGCGG GTGATGGTGA GTGCGACAGG TTCGTCGGAA
CTGCGTGAAA ATGATGTATT GCTGATTGAT ATGTCCGATT GTGATATGGA TTTACGTGAA
TTCTGTAGCG AACAGATGCT AGAACCACTG GTGTTACGTG GTGAGTATTT CTCTGAACAA
TCCCGCAATG TGGGGATGGC GGAGGTTTCG CTGATCCCGG ATTCGGCACT GTTGGGGAAA
AATTTGCGTG AGGTGGCCTT TCGCAGCCGT TATGGTTTGA ACGTGGTAGG GATCCGCCGC
AACGGTAAGA CCTTAGAAGG CAAGTTGGTT GATGACAAGT TACAGTTTGG CGATATTTTG
CTGGTGATCG GCGATTGGAA ATTGATTCGC CAGTTACAGT TAAAAACCCG CGATTTTATT
GTTCTGAACC TGCCCGCAGA AGTTGATGAA GTTGCGCCAG CCATTTCGCA GGCTCCCCAT
GCGCTATTCT GCCTGGCGCT CATGGTTGCC ATGATGCTGA CTGACGAAGT CCCGAATGTC
ATTGCCGCGC TGGTGGCCTG TCTGTTGATG GGGCAGTTCC GGTGTATCGA TATGGAAAGT
GCCTACCGTT CAATCCATTG GCCGAGTTTG ATTCTGATTA TCGGGATGAT GCCTTTCGCC
CAGGCATTGC AGAAAACCGG TGGGGTAGAT TTGATTGTTC GCGGACTAAT GGATGTCGCG
GGTGGAATGG GGCCAAGGGT GATGCTGCTG TGCTTATTTG TACTGTGTGC GACGATTGGG
CTGTTTATCT CTAATACCGC CACCGCCGTA TTAATGGCAC CAATTGCTAT TGCGACCGCC
CGTGAGATGG CGCTTTCCCC ATATCCCTTC GCCATGGTTA TTGGTATCGC CGCGTCAGCT
GCTTTTATGA CGCCAGTATC TTCGCCGGTG AATACATTGG TCTTAGGCCC CGGTGGTTAT
AAATTCGGTG ATTTCGTCCG TATGGGGGTG CCGTTTACTG TACTGGTCAT GATCGTCAGT
GTGATGGTGG TTCCCTTACT ATTCCCATTC TGA
|
|---|
| Protein sequence | MNSELLWVLT LLLIAIVLFT TNKLRMDVVA LLVIIAFVMS GTLSLSEATS GFSDPNVILI
AALFVIGEGL VRTGVAYQMG DWLVKVAGHS ETKMLALLMV TVAGLGAFMS STGVVAIFIP
VVLSVASRMK ISPGRLMMPL SFAGLISGMM TLVATPPNMV VNSELVREGI KGFGFFGVTP
IGIIILFMGV AYMLVARRWL GGKQEHTEKD QWKRRTFRDL IRDYKLTGRA RRLAIRHGSP
LIGRSLDELH LRARYGANVV GIERWRRFRR VMVSATGSSE LRENDVLLID MSDCDMDLRE
FCSEQMLEPL VLRGEYFSEQ SRNVGMAEVS LIPDSALLGK NLREVAFRSR YGLNVVGIRR
NGKTLEGKLV DDKLQFGDIL LVIGDWKLIR QLQLKTRDFI VLNLPAEVDE VAPAISQAPH
ALFCLALMVA MMLTDEVPNV IAALVACLLM GQFRCIDMES AYRSIHWPSL ILIIGMMPFA
QALQKTGGVD LIVRGLMDVA GGMGPRVMLL CLFVLCATIG LFISNTATAV LMAPIAIATA
REMALSPYPF AMVIGIAASA AFMTPVSSPV NTLVLGPGGY KFGDFVRMGV PFTVLVMIVS
VMVVPLLFPF
|
|---|
| |