Gene YpsIP31758_1437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1437 
SymbolulaA 
ID5387362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1676046 
End bp1677302 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content48% 
IMG OID640864420 
ProductPTS system ascorbate-specific transporter subunit IIC 
Protein accessionYP_001400416 
Protein GI153948920 
COG category[S] Function unknown 
COG ID[COG3037] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000156476 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCT TTCGTTTCTT AATGAGTGAT GTGCTTTCTG AACCCGCAAT ACTGGTCGGT 
CTGATCGCTT TGATTGGCCT TATTGCCCAG AAAAAACCGG TGACTGAATG TATTAAAGGC
ACCGTCAAAA CCATTATGGG TTTTGTGATT TTGGGTGCAG GCGCTGGCCT GGTGGTTTCA
TCTCTGGGTG ATTTTGCCAA TATCTTCCAA CAGGCTTTCG GTATTCAGGG CGTAGTGCCA
AATAACGAAG CTATTGTTTC TGTGGCACAG AAGAGTTTCG GCAAAGAAAT GGCGATGATT
ATGTTCTTCG CTATGGTGAT CAATATCCTG ATTGCCCGTT TTACGCCGTG GAAATTTATC
TTCCTGACCG GTCACCACAC GCTGTTTATG TCCATGATGG TGGCCGTGAT TCTGGCAACT
GCTGGGCTAA GTGGCATGAT GCTGATTGCC ATCGGTTCCG TGGTTGTTGG GGTAGCGATG
GTCTTCTTCC CTGCCATTGC CCACCCTTAC ATGAAGAAGG TGACAGGATC TGATGATGTA
GCCATCGGTC ACTTCTCTAC CCTCTCCTAT GTATTGGCTG GTTTTATCGG CAGTAAGTTT
GGTAATAAAG AACATTCGAC TGAAGACATG AACGTGCCGA AAAGTCTGTT GTTCTTGCGT
GATACACCGG TCGCGATCTC CTTTACCATG TGTATCATTT TTGTCGTTAC CTGCCTGTTT
GCCGGGCCGG AAGTGGTGAA AAGCCTGAGT GGCGGTAAAA ACTGGTTCAT GTTCTCATTG
ATGCAATCCA TCACCTTTGC CGCAGGGGTT TATATTATTC TGCAAGGTGT TCGGATGGTG
ATTGCCGAGA TCGTGCCTGC TTTTAAAGGG ATTTCAGACA AGTTAGTGCC TAATGCAAAA
CCTGCGTTAG ATTGCCCGGT TGTCTTCCCT TACGCACCCA ATGCGGTACT GGTTGGCTTC
CTGAGCAGCT TTGCCGCTGG CCTGATCGGT ATGTTCGCGT TGTATTTGTT GAATATGACC
GTGATCATCC CAGGCGTCGT CCCTCACTTC TTCGTAGGTG CTGCCGCAGG GGTGTTTGGT
AATGCTACCG GCGGGCGTCG CGGGGCGATT CTCGGTGCAT TTGCTCAAGG TCTGTTAATT
ACCTTCCTGC CCGTCTTCCT GCTGCCAGTC TTAGGCGATA TTGGTTTTGC CAATACCACA
TTTAGTGATG CAGATTTTGG TGCGCTGGGT ATTTTACTGG GGATTATCGT TCGATAA
 
Protein sequence
MDFFRFLMSD VLSEPAILVG LIALIGLIAQ KKPVTECIKG TVKTIMGFVI LGAGAGLVVS 
SLGDFANIFQ QAFGIQGVVP NNEAIVSVAQ KSFGKEMAMI MFFAMVINIL IARFTPWKFI
FLTGHHTLFM SMMVAVILAT AGLSGMMLIA IGSVVVGVAM VFFPAIAHPY MKKVTGSDDV
AIGHFSTLSY VLAGFIGSKF GNKEHSTEDM NVPKSLLFLR DTPVAISFTM CIIFVVTCLF
AGPEVVKSLS GGKNWFMFSL MQSITFAAGV YIILQGVRMV IAEIVPAFKG ISDKLVPNAK
PALDCPVVFP YAPNAVLVGF LSSFAAGLIG MFALYLLNMT VIIPGVVPHF FVGAAAGVFG
NATGGRRGAI LGAFAQGLLI TFLPVFLLPV LGDIGFANTT FSDADFGALG ILLGIIVR