Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1430 |
Symbol | hisM |
ID | 5387189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1670808 |
End bp | 1671524 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640864413 |
Product | histidine ABC transporter, permease protein HisM |
Protein accession | YP_001400409 |
Protein GI | 153949106 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.00742165 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAA TCTTACATCA ATATTGGCAG GCATTACTTT GGAGTGATGG CTACCGCTTT ACCGGCATGG CGGTCACTCT CTGGTTATTA ATTTCTTCGG TCGTCATGGG GGGGTTACTG GCGCTCCCAT TGGCGGTTGC TCGGGTGTCT GAACGGAGAT GGATCCGTTT ACCAGTATGG ATTTTTACCT ATATCTTCCG TGGTACACCG CTGTATGTGC AGCTATTGGT GTTCTATTCC GGAATGTATA GTTTGGAGAT AATCCGAGGC AATGATCTGC TCAATGCTTT TTTTCGCAGT GGATTAAATT GCACTATTTT AGCGCTGACG CTTAATACCT GTGCTTATAC CACTGAGATT TTTGCCGGTG CGATCCGTTC GGTACCTCAT GGTGAAATAG AAGCAGCACG CGCCTATGGT TTCTCACGTT TTAAATTATA CCGCTGCATT ATCTTACCTG CTGCATTGCG TATCTCTTTA CCGGCATACA GCAATGAAGT GATCTTAATG CTGCACTCCA CCGCGCTGGC TTTTACCGCG ACCGTACCCG ATATATTGAA AATAGCTCGC GATATTAACG CGGCGACTTA CCAACCCTTT TATGCGTTCA GTATTGCCGC TGTACTTTAT TTGAGCATCT CCTTTACGCT AATTAGCCTG TTCCGCCAGG CAGAAAAACG TTGGTTAGCC CATATTCAAC CTCAGGCATC GCATTAG
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Protein sequence | MIEILHQYWQ ALLWSDGYRF TGMAVTLWLL ISSVVMGGLL ALPLAVARVS ERRWIRLPVW IFTYIFRGTP LYVQLLVFYS GMYSLEIIRG NDLLNAFFRS GLNCTILALT LNTCAYTTEI FAGAIRSVPH GEIEAARAYG FSRFKLYRCI ILPAALRISL PAYSNEVILM LHSTALAFTA TVPDILKIAR DINAATYQPF YAFSIAAVLY LSISFTLISL FRQAEKRWLA HIQPQASH
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