Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1429 |
Symbol | hisQ |
ID | 5385096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1670125 |
End bp | 1670811 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640864412 |
Product | histidine ABC transporter, permease protein HisQ |
Protein accession | YP_001400408 |
Protein GI | 153950649 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4215] ABC-type arginine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.0521843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGATG GATATTCCAA ACTGATATTT GAAGGTGCGC TGGTGACACT GGAGTTAGCA TTGTTCTCGG TGCTGCTGTC AGTGGTTATC GGCTTGATGG GGGCCGGTGG CAAGTTATCG TCAAACCGGT TGGTATCGGG CTTGTTTGAG TGCTACACCA CACTGATCCG TGGCGTACCT GATTTGGTTT TGATGCTGCT TATCTTCTAC GGTTTGCAGA TTACCCTCAA TAGCATTACC GAGTCCCTTG GTTTTGTACA AATTGATATT GACCCTCTCT CTGCCGGGGT TATCACCCTT GGCTTTATCT ATGGCGCTTA CTTCACTGAA ACGTTTCGTG GCGCTTATAT GGCGGTCTCT AAAGGGCAAA TTGAGGCCGC GACGGCCTTT GGTTTTACCT CCAGCCAGAT CTTTCGTCGC ATTATGTTCC CAGCCATGAT GCGCTATGCG TTGCCGGGCA TTGGTAATAA TTGGCAAGTG ATCCTGAAAG CGACGGCGCT GGTGTCAATT TTAGGCTTGA ATGACGTGGT CAAAGCCACC CAATTGGCGG GAAAAGGCAC TTATCAGCCG TTTTTCTTTG CTTTGGTTGC TGGTGCGATT TATCTGTTCT TTACCACTCT CTCTAACGGT GTCTTGTGGT GGCTGGAAAG GCGCTATTCC CATGGGGTGA AGAGGGCTGA GCTATGA
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Protein sequence | MLDGYSKLIF EGALVTLELA LFSVLLSVVI GLMGAGGKLS SNRLVSGLFE CYTTLIRGVP DLVLMLLIFY GLQITLNSIT ESLGFVQIDI DPLSAGVITL GFIYGAYFTE TFRGAYMAVS KGQIEAATAF GFTSSQIFRR IMFPAMMRYA LPGIGNNWQV ILKATALVSI LGLNDVVKAT QLAGKGTYQP FFFALVAGAI YLFFTTLSNG VLWWLERRYS HGVKRAEL
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