Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1424 |
Symbol | |
ID | 5384615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1664836 |
End bp | 1665558 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640864407 |
Product | hypothetical protein |
Protein accession | YP_001400403 |
Protein GI | 153948802 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCAAGTC AGTTCCAGAA CCGTTTAGTC GGGACCATTA TTTTAGTTGC CTTAGGTGTG ATTGTGTTAC CGGGGCTACT GGATGGCAAA AAGAAGCACT ATGAGGATGA GTTTGCTGCT ATTCCGTTAG TGCCAAAACC AGGGGATAGC CAAGAGATTG ATGTGGTTCC GCCGCTCAAT CAGCCTCTTC CCATTACGCC GCCGGAAGGT GCAGCACAAG CGGTAGGCGC CGAACTCAAC GATGATTCGG TTTCTCAGGC GGCTAATGAT GCCGGCAATC TTGCCGTTGA ACCTACGATT GTGGCACCGC CACCAATCCA GAGTAAGCCG GTTGAGGTAA AACCTACCGT GACGAAGCCG GTAGACGTTA AGCCGACAGA AACCAAGCCG ATAGAAACAA AACCAGCAGA GAAAAAACCG CTGGAAGTGA AACCTAAGCC AGAAATCAAA CCGCCGGTGG AAGAAAAAGC GCCAGTGGGG CAGGCTTATG TTGTCCAACT GGGGGCGCTA AAAAATGCAG CCAAAGTAAA TGAGATTGTC GCGATGCTGC GGTTGTCGGG GCATCGGGCG TTCACTGTAC CCGCCACGCC GGTTCAGGGT GAGATAACCC GGTTATATGT CGGGCCGGAT GCATCAAAAC AGAAATTACA ATCCGCGTTA CCTGAGCTTA ATGCATTAAG TGGTCTGAAT GGGCAAGTTA AGCCTTATAC AACGTCGCGT TAG
|
Protein sequence | MASQFQNRLV GTIILVALGV IVLPGLLDGK KKHYEDEFAA IPLVPKPGDS QEIDVVPPLN QPLPITPPEG AAQAVGAELN DDSVSQAAND AGNLAVEPTI VAPPPIQSKP VEVKPTVTKP VDVKPTETKP IETKPAEKKP LEVKPKPEIK PPVEEKAPVG QAYVVQLGAL KNAAKVNEIV AMLRLSGHRA FTVPATPVQG EITRLYVGPD ASKQKLQSAL PELNALSGLN GQVKPYTTSR
|
| |