Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1421 |
Symbol | |
ID | 5384622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1661356 |
End bp | 1662018 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640864404 |
Product | hypothetical protein |
Protein accession | YP_001400400 |
Protein GI | 153948053 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTA TACGTTTCGT CATAGATTTT ATTTTGAATA TTGATGTTCA TCTGGCTGAA CTGGTTGCGC AATATGGGAT ATGGGTTTAC GCCATTCTAT TCCTGATTTT ATTCTGTGAA ACCGGTCTGG TGGTGACACC GTTCCTGCCA GGGGACTCTC TGTTGTTTGT TGCAGGTGCC TTGGCCTCGT TGCCTTCCAA TGATCTTAAT GTCCACACGA TGGTGACCCT AATGGTGATT GCCGCCATTC TGGGGGATGC GATTAACTAC ACGATTGGCC GTATCTTCGG TGAAAAGTTA TTCAGCAATC CAGATTCTAA AATCTTCCGC CGCAGTTATC TGGATAAGAC GCATCAGTTC TACGAGAAGC ATGGCGGTAA AGCGATTATT CTGGCGCGGT TTGTCCCGAT CATTCGCACG TTTGCCCCAT TCGTGGCCGG TATGGGGAAA ATGTCTTATC GCCACTTTGC TGCCTATAAC GTGATTGGGG CGTTGGTATG GGTGCTGTTA TTCACTTATG CTGGCTACCT GTTTGGTAAC GTACCTATCG TGCAGAATAA TCTGAAGTTA TTGATTGTGA TCATTATCGT GGTGTCAATT TTGCCAGGCG TATTTGAAGT TTGGCGGCAT CGGCGTGCTG CGGTACGTCA AAAAAATCAG TAA
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Protein sequence | MEFIRFVIDF ILNIDVHLAE LVAQYGIWVY AILFLILFCE TGLVVTPFLP GDSLLFVAGA LASLPSNDLN VHTMVTLMVI AAILGDAINY TIGRIFGEKL FSNPDSKIFR RSYLDKTHQF YEKHGGKAII LARFVPIIRT FAPFVAGMGK MSYRHFAAYN VIGALVWVLL FTYAGYLFGN VPIVQNNLKL LIVIIIVVSI LPGVFEVWRH RRAAVRQKNQ
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