Gene YpsIP31758_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1407 
Symbol 
ID5385694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1646364 
End bp1647170 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content52% 
IMG OID640864390 
Producthypothetical protein 
Protein accessionYP_001400386 
Protein GI153949068 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0345183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTGGT TTACCCTTGG TCCTGCCGTT TTGGGGATAC TCTTTGCCGT TGCATTATTA 
GCCGGGTTCA TTGATTCCAT TGCCGGCGGG GGCGGCTTGT TAACCGTCCC CGCACTGTTA
GCGGTGGGAT TACCCCCAGC GCAGGCCTTG GCGACCAATA AGCTGCAATC TGTTGGCGGT
TCGTTCTCCG CCAGCCTGTA CTTTATTCGT CGTGGTGCGG TTAACCTAAA GCAGCAAAAA
CTGACAATTG CTCTGACGCT GGTGGGGTCG ATGCTCGGAG CGATTTTAGT TCAGTACATG
CGGGCTGACA TTCTGCGACA AATTTTACCG CTGTTGGTGA TCGGTATTGG CGTCTATTTT
TTACTCACCC CAAGACTGGG CGTGGTTGAT CAACAGCGCC GCTTGTCTGC TTTGCCTTTC
GCATTAATTG CTGGTGGTGG GATCGGTTTT TACGATGGCT TCTTTGGCCC CGGTGCCGGT
TCGTTCTATG CATTGGCCTT TGTTACCCTG TGCGGTTTTA ATCTGGCAAA ATCCACCGCC
CATGCCAAAG TACTCAATTT CACGTCAAAT TTAGGCGGGC TAATATTCTT TATCATCGGC
GGGAAGGTGG TGTGGAGTAT CGGCTTGGTG ATGCTGGTGG GGCAAGTCCT GGGGGCGCGC
CTTGGCGCAC ATATGGTATT GACGCGTGGT CAGAAATTAA TTCGGCCAAT GATTGTCGTG
GTGTCATTCG TCATGAGTTG CAAGCTGCTG TATGACAACC ACGGTGCTGA AATTGGCTCT
TGGCTGGGAC AGCATGTTTT TGCATAG
 
Protein sequence
MDWFTLGPAV LGILFAVALL AGFIDSIAGG GGLLTVPALL AVGLPPAQAL ATNKLQSVGG 
SFSASLYFIR RGAVNLKQQK LTIALTLVGS MLGAILVQYM RADILRQILP LLVIGIGVYF
LLTPRLGVVD QQRRLSALPF ALIAGGGIGF YDGFFGPGAG SFYALAFVTL CGFNLAKSTA
HAKVLNFTSN LGGLIFFIIG GKVVWSIGLV MLVGQVLGAR LGAHMVLTRG QKLIRPMIVV
VSFVMSCKLL YDNHGAEIGS WLGQHVFA