Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1399 |
Symbol | fadI |
ID | 5385974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1637571 |
End bp | 1638881 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640864382 |
Product | 3-ketoacyl-CoA thiolase |
Protein accession | YP_001400378 |
Protein GI | 153949591 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02446] fatty oxidation complex, beta subunit FadI |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.4 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAGC CATTACCGTT AGTGACGCGT CAGGGCGATC GCATTGTAAT AGTTAACGGC CTGCGGACCC CTTTCGCCAA GCAGGCAACT GCTTACCATG GCGTACCCGC TGTAGATTTA GGCAAAATAG TGGTCAGTGA ATTGCTGGCC AGAAGTGGCA TTTCTTCTGA GTTGATTGAT CAACTGGTTT TTGGCCAAGT AGTGCAAATG CCTGAAGCAC CTAATATTGC CCGCGAAATC GTTTTGGGTA CTGGCATGAG CGTTCATACC GATGCTTACA GCGTTTCCCG CGCCTGTGCG ACCAGTTTTC AGGCGGTGGC CAATGTCGCG GAAAGTATTA TTGCTGGCTC CGTTGATATC GCGATAGCCG GCGGGGCAGA TTCTTCATCC GTGCTGCCCA TCGGCGTCAG TAAAGCCCTG GCCCGCACAC TGGTTGACGC CAACAAGGCC CGCAGTTTAT CCCAGAAGTT GAAATTGTTT AGCCGACTTA GATTACGTGA TCTGTTGCCA GTTGCACCTG CGGTGGCAGA GTATTCAACC GGCCTGCGCA TGGGGGATAC TGCCGAGCAG ATGGCAAAAA CCTATGGCAT CAGCCGTGAG GATCAGGATG CTTTAGCGCT GCGATCCCAC CAATTGGCCG CTGAAGCCTG GCAACAGGGG TGGCTGCACG ATGAGGTGAT GACGGCTTAT ATTCCGCCTT ATCGAGAGGC CATTATTGAA GATAACAATA TCCGCAAAGA TTCCACATTG GCGCAATATG CCAAATTACG TCCGGCGTTT GATCGTCAGC ACGGTAGTGT GACGGCGGCG AACAGTACTC CGTTGACGGA CGGGGCGGCG GCAGTACTCA TGATGAGCGA ATCAAAAGCC AAAGCTCTGG GGTTGCCGCC TTTGGGCTAC CTGCGCAGTT TTGCCTTCTC TGCCATTGAT GTTTGGCAGG ATATGCTGTT AGGGCCATCC TATGCCACGC CATTAGCGTT AGACCGGGCG GGTATTACAC TGGCGGATTT GACACTTATC GATATGCATG AAGCCTTCGC CGCACAAACA CTGGCTAACC TGAAAATGTT TGCCAGTGAT ACTTTTGCTC GCGAAAAACT GGGGCGTAGC CAAGCCATCG GAGAGGTGGA TATGAGTAAA TTCAACGTAT TGGGGGGTTC CATTGCATAT GGCCACCCAT TTGCCGCTAC TGGCGCTCGG ATGATAACTC AAACGCTGAA TGAGTTGCGT CGCCGTGGCG GGGGATTGGG CTTAACCACC GCCTGTGCTG CTGGTGGGTT AGGTGCTGCG ATGATTCTGG AGGTGGAGTG A
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Protein sequence | MSKPLPLVTR QGDRIVIVNG LRTPFAKQAT AYHGVPAVDL GKIVVSELLA RSGISSELID QLVFGQVVQM PEAPNIAREI VLGTGMSVHT DAYSVSRACA TSFQAVANVA ESIIAGSVDI AIAGGADSSS VLPIGVSKAL ARTLVDANKA RSLSQKLKLF SRLRLRDLLP VAPAVAEYST GLRMGDTAEQ MAKTYGISRE DQDALALRSH QLAAEAWQQG WLHDEVMTAY IPPYREAIIE DNNIRKDSTL AQYAKLRPAF DRQHGSVTAA NSTPLTDGAA AVLMMSESKA KALGLPPLGY LRSFAFSAID VWQDMLLGPS YATPLALDRA GITLADLTLI DMHEAFAAQT LANLKMFASD TFAREKLGRS QAIGEVDMSK FNVLGGSIAY GHPFAATGAR MITQTLNELR RRGGGLGLTT ACAAGGLGAA MILEVE
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