Gene YpsIP31758_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1397 
SymbolfadL 
ID5384730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1635309 
End bp1636574 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content49% 
IMG OID640864380 
Productlong-chain fatty acid outer membrane transporter 
Protein accessionYP_001400376 
Protein GI153948147 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGA AAAACCTGTT TACCCGCTCA GCTCTGGCAG CAGCTATCGC TCTTATTTCA 
TCGAACGTTT CTGCAGCCGG TTTTCAGTTG AATGAATATT CAGCCGCCGC TCTAGGGCGT
GCTTTCTCTG GTGAAGGCGC AGTGGCTGAT AATGCTTCCG TTGGTAGCCG CAATCCTGCA
GCAATGACTT TATTCGACCG CCCTTCTTTC TCCGGTGGTG TGATTTATAT TGATCCAAGT
GTTGATATCA CGGGGACGTC GCCAAGTGGC AAAAGTACGG ATGCCAGTAA CATTGCGCCA
TCAGCGTGGG TTCCGAATCT CCACTTTATT ATGCCATTGG ATGAACAGTG GGCAATCGGT
GCTTCTGCGA CCTCTAACTA CGGTTTAGCC ACTGAATTTA ATGATGATTA TGTGGCAGGC
ATGTTAGGCG GCCAAACCGA TCTGAAAACG GCTAACCTCA ACCTAAGTGC CGCGTACCGC
CTGAATGATA ACTTCAGTTT TGGCCTGGGG TTTGATGCAG TCTATGCTGA TGCGAAAATT
GTGCGCCATC TCGGTGAAGC TGGCGGGGGT CTATTGCCTG CTAACACTGA AGCCGCCAGG
TTGGAAGGTA CCAAATGGGG TTACGGCTGG AATGCGGGTA TTTTGTATGA AATCGATAAA
GAAAACCGCT ACAGCTTCAC TTATCGTTCT GAAGTCAATA TCGATTTTGA CGGTGATTAC
AGTAACCAAC TACCTGTTAT TTTCGGTGGT CTGGGTGGAA AAACGGTCCC TGGTTCCCTA
ACTCTGAACC TGCCCGCCGT GTGGGAAGTC TCCGGCTACA ATAAAGTCGC GCCACAATGG
GCCATTCACT ACAGCATGGC TTACACCACC TGGAGCAGTT TCAAGGAGTT AAAAGCAACC
GCGTCTAATG GCGATGTGCT GTTTGATAAA CATGAAGGCT TCAGAGATGC CTACCGTATT
GCGTTAGGGA CCACCTATTA CTACGATGAT AACTGGACAT TCCGCACCGG TATTGCCTTT
GATGATAGCC CGATCCCCGC AGGAAACCGT TCAATTTCCA TCCCGGACCA AGATCGTTTC
TGGCTCAGTG CAGGTACCAC CTACGCCTTC AACAAAAATG CCTCTGTTGA TGTCGGTATT
GCTTATATGA AAGGCCAGAA TGTCAGTATT ACCGAAAAGA CCCCGGCCCC ATCTAACACC
ACATATGAGT TCAACTCGAA AGGTTCCGCG ATGCTATACG GTGTGAACTT CAACTACACA
TTCTAA
 
Protein sequence
MNQKNLFTRS ALAAAIALIS SNVSAAGFQL NEYSAAALGR AFSGEGAVAD NASVGSRNPA 
AMTLFDRPSF SGGVIYIDPS VDITGTSPSG KSTDASNIAP SAWVPNLHFI MPLDEQWAIG
ASATSNYGLA TEFNDDYVAG MLGGQTDLKT ANLNLSAAYR LNDNFSFGLG FDAVYADAKI
VRHLGEAGGG LLPANTEAAR LEGTKWGYGW NAGILYEIDK ENRYSFTYRS EVNIDFDGDY
SNQLPVIFGG LGGKTVPGSL TLNLPAVWEV SGYNKVAPQW AIHYSMAYTT WSSFKELKAT
ASNGDVLFDK HEGFRDAYRI ALGTTYYYDD NWTFRTGIAF DDSPIPAGNR SISIPDQDRF
WLSAGTTYAF NKNASVDVGI AYMKGQNVSI TEKTPAPSNT TYEFNSKGSA MLYGVNFNYT
F