Gene YpsIP31758_1393 details

Gene Information

• Locus tag: YpsIP31758_1393
• Symbol: dsbE
• ID: 5386259
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 1632101
• End bp: 1632667
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640864376
• Product: thiol:disulfide interchange protein DsbE
• Protein accession: YP_001400372
• Protein GI: 153947450
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0526] Thiol-disulfide isomerase and thioredoxins
• TIGRFAM ID: [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCTC AATCCTCATT CAATAAGCTG ATGTTTATTC CGCTGGTCCT TTTCTTACTG 
CTGGTCGTGG CATTCCTGAT ACAACTGACC CGTAATGCCA ACGGCGAAGA TCCAACGATG 
TTGGAGTCGG CGCTGATCGG CAAGCCCGTA CCGGCATTCA AACTGGAATC CCTCGAACAG 
CCGGGTAAAA CCTTTGATCA GGCGGTATTA CGTGATGGTA AACCGATACT GCTGAATGTT 
TGGGCAACAT GGTGCCCAAC TTGCCGTGCC GAGCATGAAT ACCTGAATAA ATTGGCGGCT 
CAAGGTATCC GTGTGGTGGG CCTGAATTAT AAAGATGACC GTAGCAAAGC CGTGCAGTGG 
CTGAATTCGC TGGGTAACCC TTATTTTCTC AGTTTGTATG ATGGTGATGG AATGTTGGGC 
CTGGATTTGG GGGTATACGG CGCACCAGAA ACGTTCCTTA TCGATGGTCA AGGGGTTATC 
CGTTACCGCC ATGCTGGTGA TCTTAATGAT CGGGTCTGGC AGCAGGAAAT CTTACCGCTG 
TATAAAAAGT ACCAGGGGGG CGCATGA 

 

Protein sequence

MKPQSSFNKL MFIPLVLFLL LVVAFLIQLT RNANGEDPTM LESALIGKPV PAFKLESLEQ 
PGKTFDQAVL RDGKPILLNV WATWCPTCRA EHEYLNKLAA QGIRVVGLNY KDDRSKAVQW 
LNSLGNPYFL SLYDGDGMLG LDLGVYGAPE TFLIDGQGVI RYRHAGDLND RVWQQEILPL 
YKKYQGGA