| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1388 |
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| Symbol | ccmB |
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| ID | 5387436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1627828 |
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| End bp | 1628487 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640864371 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_001400367 |
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| Protein GI | 153946937 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTATCA GCGTGTTGCG CCGTGAATTA AAAATAGCCT TTAGAAAAGG TGCGGAAATC
GTTAACCCGC TGTGGTTCTT TTTGATCGTT ATTACGCTGT TCCCATTGGG GATAGGCCCA
GAGCCACAAT TGCTGGCTCG CATTGCACCG GGCATCGTGT GGGTAGCGGC TTTGTTGGCC
TCGTTACTCT CGTTGGAGCG CTTATTCCGT GATGATTTTT ACGATGGCTC CCTTGAACAG
TTGCTGTTAT TGCCTACACC ACTCCCCCTC ACCGTCTTAG GCAAAGTATG TGCTCACTGG
GTCGTCACTG GGCTGCCTTT ATTGGTGTTA TCACCGTTGG TCGCTTTATT ACTTTCTCTG
GACGTCAATA CCGCTATCGC GATGGGGCTG ACGCTCCTGC TTGGGACACC AACACTGAGT
TTTATCGGTG CTATCGGCGT GGCGTTGACG GTGGGGTTAC GTAAAGGCGG GGTGCTGCTG
AGTCTATTGG TTTTGCCGCT GTATATCCCG GTTTTAATCT TTGCGACGGC GGCCATTGAT
GCCGCGTCAA TGGCGATGCC AATCGACGGT TATCTGGCTA TTTTAGGTGC GATGCTGGCA
GGGAGTGTGA CACTTGCGCC TTTTGCGACG GCAGCAGCGT TACGGGTGAG CATACAGTAA
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| Protein sequence | MFISVLRREL KIAFRKGAEI VNPLWFFLIV ITLFPLGIGP EPQLLARIAP GIVWVAALLA
SLLSLERLFR DDFYDGSLEQ LLLLPTPLPL TVLGKVCAHW VVTGLPLLVL SPLVALLLSL
DVNTAIAMGL TLLLGTPTLS FIGAIGVALT VGLRKGGVLL SLLVLPLYIP VLIFATAAID
AASMAMPIDG YLAILGAMLA GSVTLAPFAT AAALRVSIQ
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