| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1359 |
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| Symbol | |
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| ID | 5387059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1590210 |
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| End bp | 1591403 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640864341 |
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| Product | ImpA domain-containing protein |
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| Protein accession | YP_001400338 |
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| Protein GI | 153949732 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.906132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAC AGAGTATCGC TGAACGTGCC GGTTATTATC AAAGCATGAT GCAGCCCATT
CCAGGTGACT TTCCTTGTGG CAAAAATCTG GAATATGACC CGGCATTTAT TATGCTACAG
ACAAAATTGC AGCCTAAGCA GGCCGCTGAA TACGGCAATT TTGTTGAGGT CGCTGAACCT
AATAACTGGA CAGATATCGA GCGTAAATGC CTTGAACTCC TGAATAATTC TCGGGATATT
CGGCTGTTTA TTATTCTGAT GCGCTGCCGG ATGCGTCAGG TCGGTGTGGG CGCGTTGCAA
GAAGGGCTGG AAGCCATACT TTGGTGCCTC GACACTTGGC CTGATCAGCT ACATCCTCAG
CTGTTTGATG AAGGGGAATT TGAACCTTTA ATGCGCGGTA ATGCTTTTGC TGAACTGGAA
GACATTGATG GTTTTATCGC CGACTTCCGT AATCAGCAGT TACCCAAAGC CGCTGGCGTG
CAACTTTCCA TCAAAGAGTT TGAAAAGGCA CACTCCGTTC CTCGAGAAGA AGGGGCATTG
GACGAAGGGA CTCTGGAAGC CGTCAAGCAA GAGTGGCAGA ACCGATCAGA TCACACCATT
CTTTCACTCC AGCACGCTTA TGCCTTGTTG CAAGGATTAG CCACGCGCCT CAACAACTCC
CTCGGTGAAG ACACACCTGA TTTTGTCAGA ATGACCTCGG TGTTACGCCA CTTTGATGCC
GCGATAACCC CGATAGCGCC TATCGTGGTG CCAGAACCTA TTGAGACCCC AGACGTTGTC
GAGCTCTATC CGGTCGCCAC AGCGATGCTA GCAAGCACAG AAATGCCAGT GACCGCCGAG
GTACAGACGG TTGCAGAGAC ACAAATGGCC ATACCCATTG AGGCTCCCCA ACAGCGTCAA
GCGGTGGTAA CCCCATCCCC GCCGTTGCAG CCGTTACAGT TGCAATCGGC ACAGTTGCAA
CCTGTACCGA TACAGTCGCC GCCGGTGCCT GTCCAACAGC AGGGGATCCA AAACAGGGCT
GATGCGTTAG CCCGGCTTAT AGAGGTGCGA GAGTGGTTTA CCGCCATGGA ACCGAGTAGC
CCGGTCATTG CCTTACTGGC TTTTTCAGAA AAAACTATCG GCAAAAGCTT CGGCGAATTG
CTGCAGTTCA TTCCTCAGGA ACTGATTTCG AAACTCAATG AAGGACAGGA GTAA
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| Protein sequence | MSEQSIAERA GYYQSMMQPI PGDFPCGKNL EYDPAFIMLQ TKLQPKQAAE YGNFVEVAEP
NNWTDIERKC LELLNNSRDI RLFIILMRCR MRQVGVGALQ EGLEAILWCL DTWPDQLHPQ
LFDEGEFEPL MRGNAFAELE DIDGFIADFR NQQLPKAAGV QLSIKEFEKA HSVPREEGAL
DEGTLEAVKQ EWQNRSDHTI LSLQHAYALL QGLATRLNNS LGEDTPDFVR MTSVLRHFDA
AITPIAPIVV PEPIETPDVV ELYPVATAML ASTEMPVTAE VQTVAETQMA IPIEAPQQRQ
AVVTPSPPLQ PLQLQSAQLQ PVPIQSPPVP VQQQGIQNRA DALARLIEVR EWFTAMEPSS
PVIALLAFSE KTIGKSFGEL LQFIPQELIS KLNEGQE
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