Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1345 |
Symbol | |
ID | 5387738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1574901 |
End bp | 1575749 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640864327 |
Product | hypothetical protein |
Protein accession | YP_001400324 |
Protein GI | 153949926 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGACACT CATTGCAAGA AGTGTTAGAT GCTGTAGAAA GAAATCCATA CATCAATAGC GAAGATAAGA CGCGTCAACG AAATAATGTT ATGCGTTCTA TTATGTACAA TAAACAGAAT GAACTGGATC AAGTAAAAAA TAGCATTGCA AGTAAATTTA TCAAATGGAG CCTTATAAAG GATCAATTTA TCAGTGAGGT GACACGTTAT TCATCGGATA TAACGGCCAA AGTAAATACT GGTGAAATAA CGACTGAGAC AGCGATAAAA CTATTGGATA AAGAGTTGTC CGATTTGAGA AATCAAGATG AAGAAATGAC AAGGGAAAGA GTAAAGCAGG CTGTCATTAT TAAAGCTTCA GTAAAGAAAA ATAATGATGT AAAAAGAAGA GAAATTGTAA GTTTAACAAT TGCTGGCGTT GGATTTGTTA CCGCAGGTTT ACAAATTGTG GCTGGTGTTG GGATGGTTGG AAGTGTTGCG GGAACCATCC CTGGTGCGTT ATTGATAGCG CATGGTACAA ACAATATTAT TGAGAATGGC TATTATATTT TGTATAGGGA GTCCTATACT GGTCCCCTTA AATTTCTATA TGAAGGTGTA GGTGCTCAAT TTGGGCTGAG TAAGAGTGAT GCAGATGTTA TGTATACTGC GGTAGATATT GCGTTATCAA TAAATGGAAT AATGAGTTAT AAATTAACGG AAGATGCTGC ACGATTATAT CGCTATGTAA ATGCAGATCT GTTATGGGGC TTGAAGTCAA TGGGAATTAA AAATATGACT ACAGCAGAAA TATTGCTTGA GATTGTTGGT GATATTAATA CTGCAATTAG TCAGGTAAGG AATTACTAA
|
Protein sequence | MGHSLQEVLD AVERNPYINS EDKTRQRNNV MRSIMYNKQN ELDQVKNSIA SKFIKWSLIK DQFISEVTRY SSDITAKVNT GEITTETAIK LLDKELSDLR NQDEEMTRER VKQAVIIKAS VKKNNDVKRR EIVSLTIAGV GFVTAGLQIV AGVGMVGSVA GTIPGALLIA HGTNNIIENG YYILYRESYT GPLKFLYEGV GAQFGLSKSD ADVMYTAVDI ALSINGIMSY KLTEDAARLY RYVNADLLWG LKSMGIKNMT TAEILLEIVG DINTAISQVR NY
|
| |