Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1344 |
Symbol | |
ID | 5386221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1571644 |
End bp | 1574070 |
Gene Length | 2427 bp |
Protein Length | 808 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640864326 |
Product | putative anaerobic dimethyl sulfoxide reductase, A subunit |
Protein accession | YP_001400323 |
Protein GI | 153949485 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAACA ATAAAACACC GCTCACCGGC TCACTGAGTC GTCGTGAATT TATTCAAACA TCCGCCGTAG TGACCGGGGC TGCGGCAATT GCCGGTTCAA TCGCCCTCCC ATTCTCCGTC CATGCTGCGG CTTCAGAACA TGCCCCCACG GCGGCTGAAG AGAGCATTAA ATACAGTGCT TGTCTGGTTA ACTGTGGCAG CCGCTGTCCG CTAAAAGTTC ATGTTAAAAA TGGTGAAATA ATTAAAATTG CTAATGAAGC CATTTATGAT GATTCCACCT TTGGCTTACA CCAAATTCGC CCCTGCTTAC GTGGCCGTTC AGTACGATGG AAAACCTATA ATCCGGATCG GGTTAAATAT CCGATGTTGC GAGTGGGTAA ACGCGGTGAA GGTAAATTCA AGCGTATCAG TTGGGATGAA GCCACAACTA TAGTTGCGGA TAATCTGAAA AAAACGATTG TTCAATACGG CAACGAAGCG ATTTATTATC AATATGGCTC TGGTTCAACT GGGGCTAATT TACAAGGCCG CAATGCCTGT AAACGTATGT TGAGTTTGAT CGGCGGTTAT CTTGATCAGC ACGGTACTTA TTCTACCGCC CAAATCAATA CCGTCATGCC TTATGTCTAC GGCAACTTAG ATGAAACACT ACTGGACGAA ATTAAAAATT CTGATCTGGT GGTGATGTTT GGTCACAATC TGGCAGAAAC ACGGATGTCA GGCGGTGGGC AATATATTGA AACGGTTCAG GCGTTGGGTC AAAGCCGAGC CAAAGTCATT ATTATTGACC CACGCATGAC CGACAGTGTG ACCACCCTTA ACGCCGAATG GATCCCGATA TTCCCAGGGA CCGATGCGGC ACTGGTCGCC GCGCTGGGGC ATGTTTTAAT TAAAGAGAAT CTGACTGACG AACGTTTCCT GCAACAATAT TGTGTCGGTT GGGATGCCAC CACATTGCCC GCATCGGCCC CAGCTAACGG ATCGTATAAA GATTATATTT TAGGTCTGGG TGCTGACGAA ACCGAAAAAA CACCAGAATG GGCCAGTGAG ATAACCGGTA TTTCACCAAC ACGTATTATT CAATTAGCCA GAGAACTGGG TAATGCCCGC GCAGCCTGGA TTTCACAGGG TTGGGGAATT CAACGCACAG CGAACGGGGA GCAAGCGTCC CGCTCGATTA TGATGCTCCC ATTAATGACC GGTAATATTG GCCGTGCCGG AACCAATACC GGTGCCTGGG GTGGCAACGT AAAATACCCG GTTCCCGGAT TCAGCATTCC CAATCCAGTC AAAACGGCCA TTCCTTGCTT TATGTGGACC GATGCTATTT TCCGCGGCAC TGAAATGACC GCTAAAAATG CCCATGTGAA AAATAAAGAA AAACTGGATA CCAATATTAA GTTTCTTTGG AACTACGCCA GTAATGTTAT AGCAAATCAG CACTCTGATC TGAATAAAAC CAATACTATT TTGCAAGATG AGTCATTGTG CGAATTTATT TTGGTCTGGG AAAACCATAT GACCAATTCG GCGAAATACG CGGATTTATT ATTGCCAGAC GTCACGTCGG TTGAATCAAA TGACCTGATT GATAACTCCT ATGCCAGTGG CGCTTATCAC TATGTCACCC GGATGCAAAA TACCATTGAG CCGCTGTGGG AATGCCGCCC CTCATACGAT GTATTAGCCG AGATTGCCAC CAAATTAGGC GTGGGGGATG CCTTTACTGA AGGACATACC CAGCAAGAAT GGATTGAAAT CAGCTATAAC AAAATGCGTG ATAAAAATCC GGCGCTGCCG CCTTTCAGTG ACACCCATAA CAAAGGCATT ATTGACCGTA TTTTTGCTGA CAGTAGCCAA TATATCGCGT TAAAAGATTT CCGCGATGAT CCAGTAAATA ACCCGTTAAA AACCCCATCA GGCAAGATTG AGATCTATTC CGAAGCACTG GCAACACTCG CACTCGAGTG GCAGCTGGCG CCGGGTGATC GCATTACCGC AGTGGCTGAA TATTGTCCGA CCCCTGAGGG CGTCAGTGAT CAGGAGACCC TGAAGAGCTA CCCTCTGCAA ATGACCGGTT TCCATGTTAA AGGCCATACC CACTCAACCT ATTACAATGT CGCGATGCTG CGCGAAGCGG TGCCTCATCA ATTCTGGATG AACCCGATTG ATGCACAGGC GCGTGGCATA CAGCAAGGCG AGCGGGTCGA AATATTTAAT AGCCGTGGCC GTATCCATAT TGCGGTCAAA ATTACTGAGC GGGTATTACC GGGGGTTATT GCTGTGCCAC AAGGGGCATG GCGTAATCTC AACAAGGACG GTATCGACGT GGGTGGCTGT ATCAATACGT TGACGACACA ACGCCCTTCG CCATTGGCGA AAGGTAATCC TCAACACACC AACCTCGTTG AAGTAAAACG TGCATAA
|
Protein sequence | MNNNKTPLTG SLSRREFIQT SAVVTGAAAI AGSIALPFSV HAAASEHAPT AAEESIKYSA CLVNCGSRCP LKVHVKNGEI IKIANEAIYD DSTFGLHQIR PCLRGRSVRW KTYNPDRVKY PMLRVGKRGE GKFKRISWDE ATTIVADNLK KTIVQYGNEA IYYQYGSGST GANLQGRNAC KRMLSLIGGY LDQHGTYSTA QINTVMPYVY GNLDETLLDE IKNSDLVVMF GHNLAETRMS GGGQYIETVQ ALGQSRAKVI IIDPRMTDSV TTLNAEWIPI FPGTDAALVA ALGHVLIKEN LTDERFLQQY CVGWDATTLP ASAPANGSYK DYILGLGADE TEKTPEWASE ITGISPTRII QLARELGNAR AAWISQGWGI QRTANGEQAS RSIMMLPLMT GNIGRAGTNT GAWGGNVKYP VPGFSIPNPV KTAIPCFMWT DAIFRGTEMT AKNAHVKNKE KLDTNIKFLW NYASNVIANQ HSDLNKTNTI LQDESLCEFI LVWENHMTNS AKYADLLLPD VTSVESNDLI DNSYASGAYH YVTRMQNTIE PLWECRPSYD VLAEIATKLG VGDAFTEGHT QQEWIEISYN KMRDKNPALP PFSDTHNKGI IDRIFADSSQ YIALKDFRDD PVNNPLKTPS GKIEIYSEAL ATLALEWQLA PGDRITAVAE YCPTPEGVSD QETLKSYPLQ MTGFHVKGHT HSTYYNVAML REAVPHQFWM NPIDAQARGI QQGERVEIFN SRGRIHIAVK ITERVLPGVI AVPQGAWRNL NKDGIDVGGC INTLTTQRPS PLAKGNPQHT NLVEVKRA
|
| |