Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1342 |
Symbol | |
ID | 5386156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1570237 |
End bp | 1571013 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640864324 |
Product | putative anaerobic dimethyl sulfoxide reductase, C subunit |
Protein accession | YP_001400321 |
Protein GI | 153948447 |
COG category | [R] General function prediction only |
COG ID | [COG3302] DMSO reductase anchor subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGAAT TACCTTTAGT ATTTTTTACC GTGCTCGGGC AGACCGCCGT CGGGCTGTTT ACACTGGCGT GGCTCAGTAA CAAGCTAGGG ATGACCACGC CGCTGCAACT GAAGCAGGCC AATATTGTTG GGCTGATTCT GGTGATGGCC GGCCTGTTAA TTGGCACCCT GCATGTTGGG CAACCTCTGC GGGCGATAAA TATGTTACTG GGTGTTGGCC GTTCGCCAAT GAGTAATGAA ATTCTGCTCA GTGGCCTGTT TGTTGCCATG GCTTGCGGCA CGGTATTCTT TTCGACTCTG GTGAAAAATT CGCTACTGGC GGCGCTGTGT AATTTTGCCA CTGTCCTGGT TGGTCTGACT TTTGCTTGGT CAATAACTCA AGTCTATCAA CTGACCACGG TTCCTAATTG GGATACGTCA TATACCTCAT TGCAACTTTG GATGACGGTA TTGGTTGGCG GTGGGGCTTT CGCTATGTTA ACCGGGGCGC GTCAACTTGG TGCCATAGCA TTGCTAGCCG GTGCCATTGT GACCTTGGTG AATAAACCGG GTTATTTAAC TTTCCTCGGG CAAGGCTCGG CGGAATTGAG TAGCCAGCAG ACCCTCTTCT GGGGAATTCA GATCCTGCTG TTGGTATTAG GCGTTTTTGT GGCCGCTGCA GCGTTACTGA AAGACAAAAT CCCACGGGCA ACACTGGCAG TGTGTGCATC AGCGCTTATC ATCGGTGAAT TAGCCGGGCG GATTGCCTTT TATAATCTCT GGCAAATACC AATGTGA
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Protein sequence | MHELPLVFFT VLGQTAVGLF TLAWLSNKLG MTTPLQLKQA NIVGLILVMA GLLIGTLHVG QPLRAINMLL GVGRSPMSNE ILLSGLFVAM ACGTVFFSTL VKNSLLAALC NFATVLVGLT FAWSITQVYQ LTTVPNWDTS YTSLQLWMTV LVGGGAFAML TGARQLGAIA LLAGAIVTLV NKPGYLTFLG QGSAELSSQQ TLFWGIQILL LVLGVFVAAA ALLKDKIPRA TLAVCASALI IGELAGRIAF YNLWQIPM
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