Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1338 |
Symbol | |
ID | 5387879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1567170 |
End bp | 1567571 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640864320 |
Product | putative lipoprotein |
Protein accession | YP_001400317 |
Protein GI | 153949953 |
COG category | [S] Function unknown |
COG ID | [COG4259] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACCC GCGCAATAAA CCTTAATGAG TATGGATACT GCAAGATGAA ATTACTGAAG AAAATATCGT TGTTGCTGGC CGTCGCCGTT TTAGCGGGCT GCGTGACTGC ACCTAAGCCT ATTTATAATT GGGATAATTA TCAGTCAACG ATTTATGAAT ATTACAAATC GAATGAAACG CCTGAGCAGC AAATTGCGGC ACTGAAAGAA AATATTGAGA AGTCACAAGC TAAAGGTTTG CCAGTCCCCC CTGGCTTGCA CGCGCATCTG GGGATGCTGT ATGCCAACAC CGGTCATCCG GAATTAGCCA TGGCTGAATT TAACACGGAG AAAGCCACTT TCCCTGAGTC TGCTCCGTTT ATGGATTTCT TAATGAGCAA GGATAAAGGG GCATTTAAAT GA
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Protein sequence | MATRAINLNE YGYCKMKLLK KISLLLAVAV LAGCVTAPKP IYNWDNYQST IYEYYKSNET PEQQIAALKE NIEKSQAKGL PVPPGLHAHL GMLYANTGHP ELAMAEFNTE KATFPESAPF MDFLMSKDKG AFK
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