Gene YpsIP31758_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1338 
Symbol 
ID5387879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1567170 
End bp1567571 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content44% 
IMG OID640864320 
Productputative lipoprotein 
Protein accessionYP_001400317 
Protein GI153949953 
COG category[S] Function unknown 
COG ID[COG4259] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCC GCGCAATAAA CCTTAATGAG TATGGATACT GCAAGATGAA ATTACTGAAG 
AAAATATCGT TGTTGCTGGC CGTCGCCGTT TTAGCGGGCT GCGTGACTGC ACCTAAGCCT
ATTTATAATT GGGATAATTA TCAGTCAACG ATTTATGAAT ATTACAAATC GAATGAAACG
CCTGAGCAGC AAATTGCGGC ACTGAAAGAA AATATTGAGA AGTCACAAGC TAAAGGTTTG
CCAGTCCCCC CTGGCTTGCA CGCGCATCTG GGGATGCTGT ATGCCAACAC CGGTCATCCG
GAATTAGCCA TGGCTGAATT TAACACGGAG AAAGCCACTT TCCCTGAGTC TGCTCCGTTT
ATGGATTTCT TAATGAGCAA GGATAAAGGG GCATTTAAAT GA
 
Protein sequence
MATRAINLNE YGYCKMKLLK KISLLLAVAV LAGCVTAPKP IYNWDNYQST IYEYYKSNET 
PEQQIAALKE NIEKSQAKGL PVPPGLHAHL GMLYANTGHP ELAMAEFNTE KATFPESAPF
MDFLMSKDKG AFK