Gene YpsIP31758_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1337 
Symbol 
ID5386424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1566517 
End bp1567188 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID640864319 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_001400316 
Protein GI153949463 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.919367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAA AAATATTTTT AAGCACGATG TTTATAACCG CTTTTTTATT AAGTGGGTGT 
GCTACCGAAT CATCACGTTC CCTTGAAGTG GCAAAGGTCG CCTCTTATGG CACCCAATAT
AATGGCCCAC GTAGCCCTAT TTCTGTCGGT AAGTTTGATA ATCGCTCCAG CTATATGAGT
GGGTTGTTCT CCGATGGGGT AGACCGCTTG GGGAATCAAT CCAAAACCAT TCTGGTGACA
CATTTGCAAC AAACGGGGCG CTTTAACGTG TTAGAGCGTA CCAATATGGA AGAACTTAAA
AACGAAGCCG CTATTTCAGG GAAAAGCCAG CAACTAAAAG GTGCCACCTA CGTGGTGACG
GGTGACGTGA CTGAGTTTGG CCGCAAAGAA ACCGGGGATC GTCAACTGTG GGGCATTTTG
GGTCGTGGTA AATCTCAGGT GGCTTATGCC AAGGTCAATC TGAATATCGT TAATGTTAAT
ACCTCCGAAG TGGTGTTCTC TTCACAGGGG GCGGGTGAGT ACGAACTGTC TAACCGTGAA
GTGATCGGTT TTGGTGGTAC TGCCAGTTAC GATTCGACGC TGAATGGCAA AGTGCTGGAT
TTAGCAATTC GTGAAGCCGT GAACAACTTG GTCGCAGGTA TTGAATCTGG TGCATGGCAA
CCCGCGCAAT AA
 
Protein sequence
MKRKIFLSTM FITAFLLSGC ATESSRSLEV AKVASYGTQY NGPRSPISVG KFDNRSSYMS 
GLFSDGVDRL GNQSKTILVT HLQQTGRFNV LERTNMEELK NEAAISGKSQ QLKGATYVVT
GDVTEFGRKE TGDRQLWGIL GRGKSQVAYA KVNLNIVNVN TSEVVFSSQG AGEYELSNRE
VIGFGGTASY DSTLNGKVLD LAIREAVNNL VAGIESGAWQ PAQ