| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1330 |
|---|
| Symbol | |
|---|
| ID | 5387987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 1559217 |
|---|
| End bp | 1560095 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640864312 |
|---|
| Product | LysR family substrate binding transcriptional regulator |
|---|
| Protein accession | YP_001400309 |
|---|
| Protein GI | 153949076 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTATT CCCCTGAGGC ATTGATTGCT TTTGTTGAAG CCGCGGCCCT TGGATCTTTC
TCAGCCGCCG CCCGTAAGCT GCGTAAAAGC CAATCAACCA TCAGCACTGC TATCGCCAAT
CTGGAAGCGG ACCTTGGCTT AACCCTATTT GACCGACAAG CCCGTCAGCC AGTGTTAACC
GATCACGGTC GCCGTGTGTT GGCTCACGTA CAAGAGATTT TGGCCGCCGG TGAGCGCCTG
ACTGATTTAT CTATCCGTCT GGCGGGTCAA GTTGAGACGC GATTAACATT CGTTCTATCT
GATACCTATT ATCAGCCAGC ACATCATGAA AATCTGCTAC ACCGCTTTGA GCAGCGCTAC
CCTGATGTCG AATTCGAATG TCTGGTTGCC GAAGATGAAG ATGTCATTGA CCTCTTGCAA
CTCAAACGCG CCCATATCGG TGTAGTGGAA ATGCAAGAAC GCTATCCCCC GGATATTGCG
GCCACTCGGC TGGCCGCACA GACTGAAATG GCGGTGTTTG TGCTACGCGG TCATCCTCTG
ACCAGACTTC CTCACCTGCA AAATGAGCAA CTGGCCACCA CACGTCAGCT GTGTCTGAAC
ACCTATAACC GCACTGATCA TAATCAATCT CAAGGTTTGA CATGGTCCGC CCCCAGCTAT
TTGATGTTGC TAGAGATGGC TGAGCAAGGC TTTGGCTGGG CGATCTTACC CCGTTGGCTG
GTAGAACAAT TCGGGCGTGA AAAACTGGTG ACTTTGCCGG TGCAAGGCTG GCCAAAAATG
ATCTCCATTG ATGCGGTTTG GTCGAAAAAA AGCCCACCGG GGCCTGCTGG CTATTGGCTA
TTAGATCAAT TAACGGAAGG CACTAACTCA CCACACTGA
|
|---|
| Protein sequence | MHYSPEALIA FVEAAALGSF SAAARKLRKS QSTISTAIAN LEADLGLTLF DRQARQPVLT
DHGRRVLAHV QEILAAGERL TDLSIRLAGQ VETRLTFVLS DTYYQPAHHE NLLHRFEQRY
PDVEFECLVA EDEDVIDLLQ LKRAHIGVVE MQERYPPDIA ATRLAAQTEM AVFVLRGHPL
TRLPHLQNEQ LATTRQLCLN TYNRTDHNQS QGLTWSAPSY LMLLEMAEQG FGWAILPRWL
VEQFGREKLV TLPVQGWPKM ISIDAVWSKK SPPGPAGYWL LDQLTEGTNS PH
|
|---|
| |