Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1327 |
Symbol | mtnH |
ID | 5385394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1556167 |
End bp | 1557396 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640864309 |
Product | manganese transport protein MntH |
Protein accession | YP_001400306 |
Protein GI | 153949582 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0143258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTAATG GCCGTGCTGT CGATACATCT CGTCGCCCAT TAAGGAAGAT TAAACTCTCC TTGATGGGGC CTGCTTTTAT TGCTGCCATT GCTTATATTG ATCCCGGCAA TTTCGCAACT AATATTCAGG CGGGGGCCAC GTTTGGCTAT ACCTTGCTAT GGGTTGTCGT GTGGGCCAAC GTCATGGCGA TGTTAGTCCA GTTGCTGTCC GCCAAGCTGG GTATCGCTAC CGGTAAAAAT TTGGCTGAGC ATATCCGGGA CCGTTTCCCT CGTCCAGTGG TATGGGCCTA CTGGGTGCAA GCCGAAATTA TCGTGATGGC GACCGATTTG GCTGAGTTTA TCGGGGCGGC TATTGGCTTT AAATTGCTGT TTGGTGTGAC GCTACTGCAA GGGGCGGTGC TGACCGGTAT TGCCACCTTT CTTATTCTTA TGTTGCAAAA TAGGGGGCAA AAGCCTCTCG AATTGGTGAT TGGTGGGCTG CTATTGTTTG TCGCCGCGGC TTATATTGTT GAACTGATCT TCTCTCAGCC AGATATTGCG GCTCTTGGCC GTGGGATGCT GATCCCAAAT TTACCTGATG GTAACGCCGT ATTTTTAGCT GCGGGGGTGT TGGGGGCGAC TATTATGCCG CATGTGATTT ACCTGCATTC AGCATTAACA CAAACCGGGG GGGAAGAGTC TAAAACTGAG CGCTATGCCT CGACCAAGTT TGATGTAGCG ATTGCCATGA CGATTGCGGG CTTTGTTAAT TTGGCGATGA TGGCAACCGC CGCTGCGGCT TTTCATTTCA ATGGTTATGA GAACATTGCT GAAATCGAAG AGGCTTATAT AACCTTGCAG CCGCTGTTGG GTAATGCTGC GGCCACTGTT TTTGGTTTGA GCTTAATCGC CGCCGGGCTT TCATCAACGG TCGTGGGTAC GCTGGCGGGG CAAGTGGTCA TGCAGGGTTT TGTGCGGTTT TATATTCCAA TGTGGGTGCG CCGTATAGTC ACTATGTTGC CTTCTTTTAT TGTTATTTTA GCTGGGATGG ATGCGACACA GATATTGGTG ATGAGTCAGG TTTTACTGAG TTTTGGTATT GCACTGGCAC TGGTGCCATT ATTGGTTTTC ACCGGTAATA AAGAGTTGAT GGGGGAGCTG GTTGATACAA AAACCACCCA GATTTTAGGT AAATTGGTGG TTCTGATCGT GGTTGGGTTA AATGCCTATT TACTGATTAG CCTGCTTTAG
|
Protein sequence | MLNGRAVDTS RRPLRKIKLS LMGPAFIAAI AYIDPGNFAT NIQAGATFGY TLLWVVVWAN VMAMLVQLLS AKLGIATGKN LAEHIRDRFP RPVVWAYWVQ AEIIVMATDL AEFIGAAIGF KLLFGVTLLQ GAVLTGIATF LILMLQNRGQ KPLELVIGGL LLFVAAAYIV ELIFSQPDIA ALGRGMLIPN LPDGNAVFLA AGVLGATIMP HVIYLHSALT QTGGEESKTE RYASTKFDVA IAMTIAGFVN LAMMATAAAA FHFNGYENIA EIEEAYITLQ PLLGNAAATV FGLSLIAAGL SSTVVGTLAG QVVMQGFVRF YIPMWVRRIV TMLPSFIVIL AGMDATQILV MSQVLLSFGI ALALVPLLVF TGNKELMGEL VDTKTTQILG KLVVLIVVGL NAYLLISLL
|
| |