Gene YpsIP31758_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1317 
Symbol 
ID5384682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1543415 
End bp1543672 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content46% 
IMG OID640864293 
ProductPTS system phosphohistidinoprotein-hexose phosphotransferase subunit Hpr 
Protein accessionYP_001400296 
Protein GI153950438 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000949809 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCAGC AAGAAGTTAC TATTACTGCT CCAAACGGTC TACACACCCG TCCTGCTGCT 
CAGTTCGTTA AAGAAGCGAA AGGCTTTACC TCTGAAATTA CTGTGACCTC AAACGGTAAA
AGTGCCAGTG CCAAGAGCCT GTTTAAACTG CAAACTTTGG GCCTGACCCA AGGTACTGTA
GTCTCGATCT CTGCTGAAGG TGAAGATGAG AAAAAAGCGG TTGAGCATCT GGTAAAACTG
ATGGCAGAGC TTGAGTAA
 
Protein sequence
MFQQEVTITA PNGLHTRPAA QFVKEAKGFT SEITVTSNGK SASAKSLFKL QTLGLTQGTV 
VSISAEGEDE KKAVEHLVKL MAELE