| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1308 |
|---|
| Symbol | |
|---|
| ID | 5386576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1530429 |
|---|
| End bp | 1531649 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640864284 |
|---|
| Product | putative peptidase |
|---|
| Protein accession | YP_001400287 |
|---|
| Protein GI | 153949346 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.469292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTG AAAAAAAAGA ACATCTTAAT ACAGTATCAA GAAAGTTAAG AACGATCATG
GAGCGTGATA ATATTGATGC TGTCATTGTG ACAACGTGTG ATAATTTTTA TCATGTTACC
GGTATTCTCA GTTTTTTTAT GTATACCTTT CGGAATACGG GCACGGCTAT CGCCGTTGTC
TTCCGTGATG TGAAAATTCC ATCGCTAATC ATTATGAATG AATTTGAAGC AGCCAGCTTA
ACGTTGGATA TGCCAAATGC TGAATTAAAG ACCTTTCCTG TTTGGGTAGA TGTAGATGAT
CCGTTTAACA TGCGCGATTC TGCAAATAAT AATAAAGAGA GGCCGATAGG TCCTCCTATT
GAGAGTGTAT GTAATATACT CAAAGACGCA TTGAACGATG CCAGGGTACT TAATAAAAAA
ATAGCAATAG ACCTCAATAT AATGTCAAAC GGTGGTAAAA GAGTTATTGA TGCCGTTATG
CCTAATGTTG ATTTTGTCGA CTCAAGCTCT ATATTCAACG AGCTAAGAGT GATAAAAAGC
CCTTGGGAAA TTAAAAGACT CAGAAAAAGT GCAGAAATTA CGGAATATGG GATCACTGAA
GCATCAAAGC TCATCCGGGT AGGATGCACA TCAGCTGAAC TCACTGCCGC ATATAAGGCA
GCAGTAATGA GTAAATCTGA AACTCACTTT TCAAGATTCC ATCTTATCTC TGTTGGCGCT
GATTTTTCAC CCAAACTCAT ACCAAGCAAT ACTAAAGCCT GTTCAGGCGA CTTAATTAAA
TTTGATTGCG GCGTCGATGT TGATGGTTAT GGTGCCGATA TTGCCAGGAC TTTTGTTGTT
GGGGAACCTC CCGAGATCAC CCGGAAGATA TACCAAACAA TAAGAACTGG GCATGAACAT
ATGCTGAGTA TGGTTGCGCC TGGCGTCAAA ATGAAAGATG TATTTGATTC AACGATGGAG
GTTATTAAAA AGTCCGGGTT ACCTAATTAT AACAGAGGGC ATCTTGGGCA TGGTAATGGC
GTCTTTTTGG GATTAGAAGA GAGTCCCTTC GTTAGCACTC ATGCTACAGA ATCGTTCACT
TCAGGTATGG TGCTAAGTTT AGAAACACCT TACTACGGCT ATAATTTGGG TTCGATTATG
ATTGAAGATA TGATTTTAAT AAATAAAGAG GGTATTGAGT TTTTGAGTAA ATTACCCAGG
GATTTAGTTT CTTTTAATTA A
|
|---|
| Protein sequence | MNSEKKEHLN TVSRKLRTIM ERDNIDAVIV TTCDNFYHVT GILSFFMYTF RNTGTAIAVV
FRDVKIPSLI IMNEFEAASL TLDMPNAELK TFPVWVDVDD PFNMRDSANN NKERPIGPPI
ESVCNILKDA LNDARVLNKK IAIDLNIMSN GGKRVIDAVM PNVDFVDSSS IFNELRVIKS
PWEIKRLRKS AEITEYGITE ASKLIRVGCT SAELTAAYKA AVMSKSETHF SRFHLISVGA
DFSPKLIPSN TKACSGDLIK FDCGVDVDGY GADIARTFVV GEPPEITRKI YQTIRTGHEH
MLSMVAPGVK MKDVFDSTME VIKKSGLPNY NRGHLGHGNG VFLGLEESPF VSTHATESFT
SGMVLSLETP YYGYNLGSIM IEDMILINKE GIEFLSKLPR DLVSFN
|
|---|
| |