| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1303 |
|---|
| Symbol | cysM |
|---|
| ID | 5385787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1523543 |
|---|
| End bp | 1524421 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640864279 |
|---|
| Product | cysteine synthase B |
|---|
| Protein accession | YP_001400282 |
|---|
| Protein GI | 153947501 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.498371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAACCC TGGAACACTG CATCGGCCAT ACACCATTGG TGAAACTACA ACGCTTAAGC
CAAGGGCTAA ATGCGGAGAT TTGGGTCAAA CTGGAAGGGA ACAATCCGGC CGGTTCGGTT
AAAGATAGAG CCGCGCTGGC GATGATCCAG CAGGCAGAGT TACGTGGTGA TATTGCCCCC
GGTGATGTCC TGATTGAAGC GACCAGTGGA AATACCGGGA TTGCCTTGGC GATGATTGCC
GCCATGAAAG GCTATCACTT GAAGTTACTG ATGCCAGAAA ACATGAGTCA GGAACGTCAG
GCGGCGATGC GGGCTTACGG CGCGGAACTG ATTCTGGTTA GCCGTGAACA GGGGATGGAA
GGGGCGCGTG ATCTGGCGTT AACCATGCAG GAGAACGGCG AAGGTAACGT GCTGGATCAA
TTTAATAATG CGGATAATCC CTATGCGCAT TTTACGGGGA CCGGGCCGGA AATTTGGCAG
CAAACGGCGG GTAAAGTGAG CCACTTTGTC TCCAGTATGG GGACCACCGG TACGATCACC
GGTGTCAGCC AGTATCTAAA AAGCCAAAAT CCGCAGGTGA AGGTTATCGG CCTGCAACCA
GCAGAAGGCA GCAGTATTCC GGGGATCCGC CGGTGGTCAG CGGAATATAT ACCGGGTATT
TTCCGCCCCG AGCTGGTGGA TCAGGTGTTG GATATCACGC AGAGTGTCGC AGAGCAAACC
ATGCGGCGGT TGGCGAAAGA AGAGGGGATA TTCTGTGGCG TCAGTTCTGG TGGTGCGGTG
GCTGGGGCGC TGCGGATCGC GGCAGATAAC CCTGATGCGG TGATTGTGGC GATTATCTGT
GACCGTGGTG ACCGCTATTT ATCAACTGGG GTTTTTTAA
|
|---|
| Protein sequence | MTTLEHCIGH TPLVKLQRLS QGLNAEIWVK LEGNNPAGSV KDRAALAMIQ QAELRGDIAP
GDVLIEATSG NTGIALAMIA AMKGYHLKLL MPENMSQERQ AAMRAYGAEL ILVSREQGME
GARDLALTMQ ENGEGNVLDQ FNNADNPYAH FTGTGPEIWQ QTAGKVSHFV SSMGTTGTIT
GVSQYLKSQN PQVKVIGLQP AEGSSIPGIR RWSAEYIPGI FRPELVDQVL DITQSVAEQT
MRRLAKEEGI FCGVSSGGAV AGALRIAADN PDAVIVAIIC DRGDRYLSTG VF
|
|---|
| |