Gene YpsIP31758_1296 details

Gene Information

• Locus tag: YpsIP31758_1296
• ID: 5385145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 1515533
• End bp: 1516003
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640864272
• Product: hypothetical protein
• Protein accession: YP_001400275
• Protein GI: 153949114
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2731] Beta-galactosidase, beta subunit
• TIGRFAM ID: [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAGTG GATCCTTGGC ACAACCGGCG TTTTTTAGTG GCTTACCTGA ACGTCTTCAA 
TGGGTATTAG CTTATCTGGC GGATATGCCT TTAGCGCAGT TAAGCTGCGG GCGGCATGAG 
ATAGACGGTG AGTTGATGTT TATGAATGTC ATGGCGTTTG ACACTCAACC CGCAGAGAGT 
AAGAAAGCAG AGCTACATCG TACCTACGCC GATGTGCAAT TACTGATCAG CGGCATTGAG 
GGGATTGAGT ATTCGACCCT GACACCGACA GAACATCTGG AGCCTTATCA CCCTGATGAT 
GATTATCAGC TCATCGCCGA TATTCCAGAT AAAAGCCAGT TACGTATGTT GCCCGGCATG 
TTTGCGGTAT TTTTACCGGG AGAGCCACAT AAGCCAGGCT GCCAGATAAC CGGTTCTGGT 
GCTATCAAAA AGGTGGTCGT GAAGGTTCAT TATAGTCTTT TGAATAGCTA G 

 

Protein sequence

MISGSLAQPA FFSGLPERLQ WVLAYLADMP LAQLSCGRHE IDGELMFMNV MAFDTQPAES 
KKAELHRTYA DVQLLISGIE GIEYSTLTPT EHLEPYHPDD DYQLIADIPD KSQLRMLPGM 
FAVFLPGEPH KPGCQITGSG AIKKVVVKVH YSLLNS