| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1293 |
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| Symbol | |
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| ID | 5387580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1512418 |
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| End bp | 1513311 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640864269 |
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| Product | putative N-acetylneuraminate lyase |
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| Protein accession | YP_001400272 |
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| Protein GI | 153947675 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.519377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT TAACCGGCCT GATCGCAGCT CCGCACACTC CCTTTGATGA ACAGGGCGAG
GTCAATTATC CGGTCATTGA CCAAATTGCC GAGCATCTGA TCAATGATGG CGTGAAAGGC
GTTTATGTCT GTGGTACCAC TGGCGAAGGC ATTCATTGCT CAGTTGATGA GCGCAAGAAA
ATTGCTGAAC GCTGGGTAAA CGCCGCTCAA GGCAAACTGA GCATTACCTT ACACACCGGT
GCTCTCAGTA TTAAAGATGC GGTTGATCTC TCTCGTCATG CGGAAACACT GGATATCTTC
GCAACCTCAG CCATCGGCCC CTGTTTCTTT AAACCGGGTA ATCTGGATGA CCTCATCGCT
TATTGTCAGG CAATAGCCGC GGCTGCACCG TCGAAGGGCT TCTATTACTA CCACTCAGGT
ATGTCCGGTG TAAATTTGGA CATGGAACAG TTTCTGATCA AAGCGGAATC CAAGATCCCT
AACTTGTCAG GAATTAAATT CAATAACGCT GATTTGTATG AGTTTCAACG CTGTTTACGT
GTGAGTGGCG GTAAATTTGA TATTCCGTTT GGCGTTGATG AACATCTGCC GGGTGGATTA
GCTGTAGGGG CTATTGGCGC TGTTGGCAGC ACTTATAACT ATGCCGCTCC GCTGTTCCAT
AAAATTATCG CTGACTTTAA TGCGGGTGAT CAGGTTGCGG TACAGCGTGG AATGGATCAC
GTTATCGCCC TGATCCGTGT GCTGGTCGAA TTCGGTGGTG TTGCCGCCGG TAAGGCCGCG
ATGCAATTAC ATGGTATTGA TGCCGGTAAC CCACGTCTGC CACTGCGTGC CTTGACCAAA
GAACAGAAGC AAACCGTGGT TAACAGAATG CGTGACGCTA TTACGTTGCA GTAA
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| Protein sequence | MKKLTGLIAA PHTPFDEQGE VNYPVIDQIA EHLINDGVKG VYVCGTTGEG IHCSVDERKK
IAERWVNAAQ GKLSITLHTG ALSIKDAVDL SRHAETLDIF ATSAIGPCFF KPGNLDDLIA
YCQAIAAAAP SKGFYYYHSG MSGVNLDMEQ FLIKAESKIP NLSGIKFNNA DLYEFQRCLR
VSGGKFDIPF GVDEHLPGGL AVGAIGAVGS TYNYAAPLFH KIIADFNAGD QVAVQRGMDH
VIALIRVLVE FGGVAAGKAA MQLHGIDAGN PRLPLRALTK EQKQTVVNRM RDAITLQ
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