Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1276 |
Symbol | |
ID | 5387095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1496843 |
End bp | 1497439 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640864253 |
Product | NUDIX family hydrolase |
Protein accession | YP_001400256 |
Protein GI | 153947815 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTCA AAATTGAAAA TATACAGTGT GAATTGTTAT CAAAGAACTG GTTTAAATTA CACAAATACA CCTTTGATTT AAAAACAGAT GAGGGAACCT CGGTACAACA AATCCGTGAA GTCTATGACC GGGGGAACGG TGCGACTATC TTGTTGTATA ACCGCCAACA GGGCACGGTG GTGTTGATCG AACAATTCCG GATGCCAACC TATGTTAACG GCAATGCCAG CGGTATGTTG CTGGAGGCGT GTGCCGGTTT ACTGGATAAC GATTCGCCAG AGGCGTGTAT CCGCCGTGAA GCGATGGAAG AGACGGGTTA TCAGGTTGAT AAAGTACAAA AGCTGTTCGA GGCTTATATG TCGCCGGGGG GGGTGACTGA GCTGGTCTAT TTCTTTGCGG CTGAATATCA CCCAGATCAA AAGATAACCG ATGAGGTTGG GGTAGAGGAC GAGGTCATTG AAGTCGTCGA ATTGCCGTTC CACGATGCTC TCGCGATGGT CGCGGATGGG CGAATTAAAG ATGGTAAGAC GATTATGTTG TTGCAGTATG CGCAGATTCA TTTTTTCCCT TCGTCCTTGA CGCCACAGCG GTGTTAG
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Protein sequence | MSVKIENIQC ELLSKNWFKL HKYTFDLKTD EGTSVQQIRE VYDRGNGATI LLYNRQQGTV VLIEQFRMPT YVNGNASGML LEACAGLLDN DSPEACIRRE AMEETGYQVD KVQKLFEAYM SPGGVTELVY FFAAEYHPDQ KITDEVGVED EVIEVVELPF HDALAMVADG RIKDGKTIML LQYAQIHFFP SSLTPQRC
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