Gene YpsIP31758_1271 details

Gene Information

• Locus tag: YpsIP31758_1271
• Symbol: napF
• ID: 5385741
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 1492233
• End bp: 1492736
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640864248
• Product: ferredoxin-type protein NapF
• Protein accession: YP_001400251
• Protein GI: 153948011
• COG category: [C] Energy production and conversion
• COG ID: [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
• TIGRFAM ID: [TIGR00402] ferredoxin-type protein NapF

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 0.853171
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGATT TATCGCGGCG TAAATTGCTG ACGGGTTTTT GGCAAACCGG TAAACAAGCG 
AACATTATTA TCCGGCCTCC CTGGTCGGTA TCTGAGGTTG ACTTTATTGC GGGTTGCACC 
CGTTGCCATG CCTGTGTCAG CGCCTGTGAA ACTGGCGTAT TGATTGCGGG CAGTGGTGGA 
TTCCCCGAAA TAGATTTTCA ACGTGCTGAG TGCAGCTTTT GTCAGGCCTG TGTCCAGGCG 
TGCGAGGCGG CCATTTTTAC CTCGGTAGAG CAGACGGCTT GGCAGATTAA AGCCAGTATC 
TCTGACCGTT GTTTGCCTTA TCACCAGGTT GAATGTCGCA GTTGCCAGGA TAGCTGTGAA 
ACCCGTGCAA TTAAATTTCG CCCACGCTTG AGCGGCATTG CTCAACCTGA ATTAGACCTT 
CCTGCCTGTA CCGGCTGCGG CGCTTGTGTG CCGGGGTGTC CAGTGCAGGC GGTAACCCTT 
ACCCGGAGTG AAGATGGACG ATAA 

 

Protein sequence

MTDLSRRKLL TGFWQTGKQA NIIIRPPWSV SEVDFIAGCT RCHACVSACE TGVLIAGSGG 
FPEIDFQRAE CSFCQACVQA CEAAIFTSVE QTAWQIKASI SDRCLPYHQV ECRSCQDSCE 
TRAIKFRPRL SGIAQPELDL PACTGCGACV PGCPVQAVTL TRSEDGR