Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1260 |
Symbol | |
ID | 5387432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1480075 |
End bp | 1481145 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640864237 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_001400240 |
Protein GI | 153950242 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAT TATCGGTAGA TAACCTGCAT TTAACCTATG GTGACAATCC CGTGTTGAAA GGGGTGTCCA TGGAATTAAA ACGGGGCGAA GTTGTCTCGC TGCTCGGGCC ATCGGGGAGC GGTAAAACCA CCTTACTGCG TGCGGTTGCT GGGCTGGAGA AACCGAGTCA GGGCCACATT ATCATTGGTG AAAAGACGGT TTATGACGGC TCATCCCATA GTGAAATACC CGCCGAAGAG CGCAATCTAG GCTTAGTATT CCAGTCTTAT GCTCTGTGGC CACATAAAAC GGTATCTGAG AACGTTGCCT ATCCACTGAA ATTACGCAAA ATCTCAACGT CGGAAATCAG CCAGCGCGTA CAAGCGGTGC TTGAACAGCT TGGACTGGGG GCGCTTGGCA ATCGCCACCC CCATCAACTT TCGGGAGGGC AACAACAACG GGTCGCTATT GGCCGTGCGC TGGTCTACAA CCCGCCCGTT ATCCTGTTGG ATGAACCTTT ATCGAATCTG GACGCCAAAT TACGCGAAGA AGCACGAGTA TTTCTGCGTG AACTGATCAT GAATCTCGGT TTGTCCGCGC TGATGGTAAC CCACGATCAA AACGAAGCTA TGGCAATCTC CGACCGTATC TTATTGCTTA ATAACGGTAA AATTGAACAG CAGGGGACGC CGCAGGAAAT GTACGGCTCG CCATCAACGT TGTTCACCGC CGAGTTTATG GGCAGTAACA ACCGCTTACA TGGCAAGATT ATCGACGTCC GTGATGGTAA GGCGCGTATC GAAGGTAAAG ATTGGGGGTT GTGGGGATGG GCGGGGGAGG GGGTTACCGC AGGTCAAGAA GGAACGGCGG TTATCCGTGT GGAGCGGGTT CGTTTAGGGG ATAACCTGGA TGGCAATCAG CTTGAATTAC CGTTGCTGAC CAGTATGTAT CTGGGAGACC GCTGGGAGTA TCTGTTCCGC ACCGTCGCTG ACGATTTTGT GATCCGTGCT TATGGCCCTG AAGTTCGTGG TAAAGAGTCC TGTCATCTCT CCTTACCGAC TGAACATCTG TGGATTTTTC CTAAGCTATA A
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Protein sequence | MIELSVDNLH LTYGDNPVLK GVSMELKRGE VVSLLGPSGS GKTTLLRAVA GLEKPSQGHI IIGEKTVYDG SSHSEIPAEE RNLGLVFQSY ALWPHKTVSE NVAYPLKLRK ISTSEISQRV QAVLEQLGLG ALGNRHPHQL SGGQQQRVAI GRALVYNPPV ILLDEPLSNL DAKLREEARV FLRELIMNLG LSALMVTHDQ NEAMAISDRI LLLNNGKIEQ QGTPQEMYGS PSTLFTAEFM GSNNRLHGKI IDVRDGKARI EGKDWGLWGW AGEGVTAGQE GTAVIRVERV RLGDNLDGNQ LELPLLTSMY LGDRWEYLFR TVADDFVIRA YGPEVRGKES CHLSLPTEHL WIFPKL
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