| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1220 |
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| Symbol | potC |
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| ID | 5385724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1438240 |
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| End bp | 1439505 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640864198 |
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| Product | spermidine/putrescine ABC transporter, permease protein |
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| Protein accession | YP_001400201 |
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| Protein GI | 153948099 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAA CCGAGATGGT CACCAAACCT GTAGCGGATG AGCGGCAGCA ATCTGGCCCT
ATACTGCGTC AACAACTGCG CAAAGTGAAG GCGGCCTACA CACGCCGCTC TCTCTTACTG
ATTACACCGC TGCTGCTGTT TATCGTCGTT AGCTTTATTT TCCCCATTGC GACTATCTTG
GGGAAAAGTA TCGATAACCC CGAATTGAGG GTGGCCATGC CGGTAACAGT GGCTGTACTG
GCGAATTGGC CTGGCGATGC GCTACCGGAC GAGGCAATGT TCGAGGCATT GATCACTGAT
CTGCGTAACG CGCGTAGCAA TGGATTAATG CTCTCGATCG CCAAACGGAT GAGTTATGAA
GATAACCGTT ATCGTAGCCT GATCATGTCG ACACTACGGA AAGTACCGGC TGAAGGGCCG
GTACGTGAAG CGCTAATCAG TGCGTTACCG TTGTGGGGGG AATTAAGCAC TTGGCAATCG
CTGCAACGGG CGACTCAGCC CTTGACCCGC TATTACCTGC TATCTGCATT TGACCGTAAA
GTAGACGTAG AAAGTGGGCA AATTAAGGCA TTACCGGCTG ATCAAGCGTT GTACGTTAAC
GTCTTGCTGC GGACGTTATG GATGGCGGCT GTCGTCACTC TGTTATGCGT TACCTTGGGA
TACCCGCTGG CATATTGGTT GGCAAAACAG CCCACTGGCC GCGCCAACCT GTTGTTGATG
CTGGTGTTGT TACCGTTCTG GACCTCATTG ATTGTGCGTA CCGCCAGTTG GATTGTGCTG
TTGCAGTCCA GTGGGTTAAT CAACCAGTCG CTGCTGGGGA GTGGGCTTAT CGATCAGCCA
TTGGCGCTGG TGTTTAACCG CGCCGGGGTC TACATCTCAA TGACCCATAT CCTGCTGCCC
TTTATCGTGT TGCCGCTGTA TGCCGTGATG AAAGGTATTT CGCCCAATTA TGTCCGAGCT
GCCATTTCAT TAGGTGCGCA TCCGTTTGCT GCTTTCTGGC GTGTTTATGT ACCGCAAACC
TACAACGGCG TTACGGCGGG CGCGTTACTG GTCTTTATGA TGGCGATTGG TTACTACATC
ACGCCAGCAT TGCTCGGCGG TCCGGGTGAT CAGATGGTGA GCTACTTTGT CGCTTTCTTT
ACCAATACCA CCATGAACTG GGGAATGGCC GCGGCGTTGG GGAGCCAGTT ATTGATTATC
GTCCTATTGC TGTACGTGGT TTATATCCGA GTAACCCGTA CCCAGGCTGA AACCGCGATT
CATTAG
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| Protein sequence | MSQTEMVTKP VADERQQSGP ILRQQLRKVK AAYTRRSLLL ITPLLLFIVV SFIFPIATIL
GKSIDNPELR VAMPVTVAVL ANWPGDALPD EAMFEALITD LRNARSNGLM LSIAKRMSYE
DNRYRSLIMS TLRKVPAEGP VREALISALP LWGELSTWQS LQRATQPLTR YYLLSAFDRK
VDVESGQIKA LPADQALYVN VLLRTLWMAA VVTLLCVTLG YPLAYWLAKQ PTGRANLLLM
LVLLPFWTSL IVRTASWIVL LQSSGLINQS LLGSGLIDQP LALVFNRAGV YISMTHILLP
FIVLPLYAVM KGISPNYVRA AISLGAHPFA AFWRVYVPQT YNGVTAGALL VFMMAIGYYI
TPALLGGPGD QMVSYFVAFF TNTTMNWGMA AALGSQLLII VLLLYVVYIR VTRTQAETAI
H
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