| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1219 |
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| Symbol | potD |
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| ID | 5385333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1437165 |
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| End bp | 1438193 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640864197 |
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| Product | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein |
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| Protein accession | YP_001400200 |
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| Protein GI | 153949750 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA TAATGACACT GACTACGCTG CTCGCCGGAT GGGTATTTCA AACGCACGCT
GAAACCCTGA CGGTGGTGTC ATTCGGTGGT TTAAACAAAG ACGCACAGGT TAAGGCGTTC
TATAAACCTT TCATGGCCGC CGGGAAAGGA ACAATTGAAG CCGGGGAGTA TAACGGTGAA
ATGGCCCGTA TCCGTGCGAT GGTGGAAACG GGTCAAATAG GGTGGGATAT CGTCGAAGTT
GAAGGCCCAG AACTGCTACG GGGATGCAAT GAAGGGCTAT TTGAAACCCT GGATTGGAGC
AAGTTAGGCG ATGAACGTCA GTTCATTAAA GGCACGGTTA GCCAATGTGG TTCGGGTCTT
TTTTTGTGGT CAATGCTATT AATCTACGAC GCCAGCAAAT TTAAAACCCC GGTGACCAGT
TGGGCTGACT TCTGGAATGT CACCACTTTT CCCGGCAAAC GTTCCCTGCG CAAAACTGCC
AAATTTACCA TGGAAATTGC GTTGCTGGCG GATGGCGTGA AACGTGAGGA TGTGTATCGT
GTGCTGGCGA CGCCGGAAGG TGTTGAACGT GTTTTCAACA AACTGGATCA ACTTAAACCG
AATATCCAGT GGTGGGAATC TGGGGCGCAA CCGCTGCAAT GGCTGGTGTC CGGTGATGTT
GTGATGGGGT CAGTCTATAA TGGCCGTGTG GGGTCCGCGC TAAAAGAAGG CCATGATTTT
AGAATGGTTT GGACTGACAG TATCTACGAT ATGGACAGTT GGACTATCGT CAAAGGCTCC
AAAAAAAAAG TATTGGCAGA ACAATTTATC GCCTTTGCCA ACTTAGCGGA AAATCAGAAA
GTCTTTGCAG AAAATATCGC TTATGGACCG ACCAATATCA ACGCCACCTT GATGATTGAT
CCCGAAATTG CCGCTAATTT ACCCACTGCG CCAGCCAACC TGGCTGAGGC TTTTCCCATG
AACAATCAAT TCTGGGTCGA GCATAGCGAA GATCTTGAGC AACGCTTCAA CTCTTGGGCA
GCTAAATAA
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| Protein sequence | MFKIMTLTTL LAGWVFQTHA ETLTVVSFGG LNKDAQVKAF YKPFMAAGKG TIEAGEYNGE
MARIRAMVET GQIGWDIVEV EGPELLRGCN EGLFETLDWS KLGDERQFIK GTVSQCGSGL
FLWSMLLIYD ASKFKTPVTS WADFWNVTTF PGKRSLRKTA KFTMEIALLA DGVKREDVYR
VLATPEGVER VFNKLDQLKP NIQWWESGAQ PLQWLVSGDV VMGSVYNGRV GSALKEGHDF
RMVWTDSIYD MDSWTIVKGS KKKVLAEQFI AFANLAENQK VFAENIAYGP TNINATLMID
PEIAANLPTA PANLAEAFPM NNQFWVEHSE DLEQRFNSWA AK
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