| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1218 |
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| Symbol | gabT |
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| ID | 5385192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1435823 |
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| End bp | 1437112 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640864196 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001400199 |
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| Protein GI | 153950482 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCACC GTGAATTGGA ACAACGTAGA AAAGAGGCGA CCCCACGTGG GATTGGTGTG
TTATGTGATT TCTATGCGGT ACGGGCTGAA AATGCCACGC TGTGGGATGA ACAGGGGCGG
GAATATATCG ATTTTACGGC GGGTATTGCG ACACTCAATA TCGGACACCG CCACCCGAAA
GTGATGGCCG CGGTGCGCCA ACAACTGGAC CAGTTTACCC ATACTGCCTA TCAGGTGGTG
CCTTACGCCA GCTATGTCAC ATTGGCGGAA AAAATTAATT CGCTAGCACC CATTTCTAAT
TCAAATCAAA CGGCAGCGGG CAACAGTAAA ACCGCTTTTT TCACCACTGG GGTCGAAGCG
ATAGAAAATG CCGTGAAAAT AGCGCGTGCG GCGACTGGCC GCCCTGGTGT GATTGCTTTC
TCTGGGGCAT TTCATGGCCG AACCTTATTG GCGATGGCGC TGACCGGTAG AGCGGTGCCG
TACAAAGTCG GTTTTGGTCC GTTCCCTGCC TCCATTTTTC ACGCCCTCTA TCCCAATGAG
TTGTATGGCG TGAGTGTCGA AGAGGCCATC AGTAGTGTTG AGCGCCTGTT TCGTTGTGAT
ATCAGTCCGA CACAAGTGGC GGCCATTCTA TTTGAGCCGA TTCAGGGCGA GGGTGGTTTT
AATATCGCCC CGCCGGAATT TGTCAGTGCT TTGCGCACCC TGTGTGATGA GCACGGTATT
TTGCTGATTG CCGATGAAGT ACAAACGGGG TTTGCTCGTA CAGGCAAGTT ATTTGCCATG
GAATATTATC CCGACACCAA AGTTGATGTG ATCACCATGG CGAAAAGCCT TGGGGGCGGT
ATGCCAATTT CCGCGGTCAC GGGTCGGGCC GACATTATGG ATGCCCCGTT GCCGGGGAGT
TTGGGCGGTA CCTATGCCGG TAACCCACTG GCGGTGGCTG CGTCACTGGC GGTGCTCGAT
ATTATTGCGG AAGAGAAGTT ATGCGAACGC GCTCTGATTT TAGGTGCGAA GTTGGTCGAA
ATACTGGAAA AAGCCCAAAT GAGCAATGCG GCCATTGTGG GCATTCGTGC GCGAGGATCT
ATGGTGGCGG TGGAATTTAA CGATCCCGTC AGTGGTAAAC CGTCGCCAGA ACTGACGCTT
GCCTATCAAC GTAAGGCACT GGAAGAGGGG CTGTTACTCC TGAGTTGCGG TGTCCACAGC
AACGTGATCC GCTTCCTCTA TCCATTGACC ATTCCCGACA AGCAATTTAA ACAGGCGATG
AATATTCTTA CCCGCCTACT GGCGAGCTAA
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| Protein sequence | MSHRELEQRR KEATPRGIGV LCDFYAVRAE NATLWDEQGR EYIDFTAGIA TLNIGHRHPK
VMAAVRQQLD QFTHTAYQVV PYASYVTLAE KINSLAPISN SNQTAAGNSK TAFFTTGVEA
IENAVKIARA ATGRPGVIAF SGAFHGRTLL AMALTGRAVP YKVGFGPFPA SIFHALYPNE
LYGVSVEEAI SSVERLFRCD ISPTQVAAIL FEPIQGEGGF NIAPPEFVSA LRTLCDEHGI
LLIADEVQTG FARTGKLFAM EYYPDTKVDV ITMAKSLGGG MPISAVTGRA DIMDAPLPGS
LGGTYAGNPL AVAASLAVLD IIAEEKLCER ALILGAKLVE ILEKAQMSNA AIVGIRARGS
MVAVEFNDPV SGKPSPELTL AYQRKALEEG LLLLSCGVHS NVIRFLYPLT IPDKQFKQAM
NILTRLLAS
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