Gene YpsIP31758_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1216 
SymbolpotA 
ID5384824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1432668 
End bp1433753 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content49% 
IMG OID640864194 
Productspermidine/putrescine ABC transporter, ATP-binding subunit 
Protein accessionYP_001400197 
Protein GI153950164 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACCT ATGTCAGCTT CAAAAATATC AAGAAGAGCT ACGATGGCGA CAAGCTGGTC 
GTTAAAAACC TGAATCTGGA CATTCATGAG GGGGATTTTT TAACCCTGCT CGGCCCTTCT
GGTTCAGGTA AAACCACCAG CCTAATGATG CTAGCCGGGT TTGAAACCCC CACTCAAGGC
GAGATTACGC TGCGTGATAA ACCCCTGCAT AACCTGCCCC CCCACCAACG GGGGATCGGT
ATGGTTTTCC AAAATTATGC CCTCTTCCCA CATATGACCG TAACTGAAAA TCTGGCCTTT
CCACTCACGA TCCGCCGATT GAATAAGGCT GATATCAAAG AGAAAATTGA CCGTATATTG
GATATGGTGA AGTTGAAGAA TTTGGCTGAC CGCTATCCCG CGCAGATGTC TGGTGGGCAG
CAGCAACGGG TTGCATTGGC ACGTGCCTTG GTATTTGAGC CCAAACTGGT GCTGATGGAT
GAACCACTCG GGGCGCTGGA TAAGCAGTTA CGTGAGCATA TGCAATTGGA AATCAAACAG
TTACATAAAA TGCTTGAATT GACCATTGTC TACGTCACCC ATGACCAAAG CGAAGCAATG
ACTCTGTCAA ATCGGGTGGT GGTATTTAAC GATGGTATTA TTCAGCAAAT GGATAGCCCA
AGCGTGATTT ATGAACAGCC AAGCAATACT TTTGTGGCGC AATTTATTGG TGAAAATAAC
TGCTTACTGG CCGTTAATCA GGGCAGTGAC GGGGAATATT ACCGTGCCAT GTTGGACGAT
GGCACCCGCC TGCAAGCATT AAAAGTGTGC CCCAGCTCAC CGGGTAAAAA AATTATGTTA
TGTATTCGGC CGGAGCGCGT CAGTGTGAAT CATCCTGCGG TGGGCAGCCA GCAGATCAAA
GCCCGCATTC AGCAATTTAT TTATCTGGGG GACCATGTGC GGATGATGAC GGAGGTTGCA
GGCCAAGGGA ATTTCATGGT GAAACTCTCT GCCGCGCATA TCGAACCACA CTGGCAGCCG
GGAAGTGAGG TGTTGCTGTC GTGGATGCCT GCGCATTTAA GGGCACTGGA GGGGGTGACA
CACTGA
 
Protein sequence
MRTYVSFKNI KKSYDGDKLV VKNLNLDIHE GDFLTLLGPS GSGKTTSLMM LAGFETPTQG 
EITLRDKPLH NLPPHQRGIG MVFQNYALFP HMTVTENLAF PLTIRRLNKA DIKEKIDRIL
DMVKLKNLAD RYPAQMSGGQ QQRVALARAL VFEPKLVLMD EPLGALDKQL REHMQLEIKQ
LHKMLELTIV YVTHDQSEAM TLSNRVVVFN DGIIQQMDSP SVIYEQPSNT FVAQFIGENN
CLLAVNQGSD GEYYRAMLDD GTRLQALKVC PSSPGKKIML CIRPERVSVN HPAVGSQQIK
ARIQQFIYLG DHVRMMTEVA GQGNFMVKLS AAHIEPHWQP GSEVLLSWMP AHLRALEGVT
H