| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1212 |
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| Symbol | mdtD |
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| ID | 5384904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1423258 |
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| End bp | 1424655 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640864190 |
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| Product | multidrug efflux system protein MdtE |
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| Protein accession | YP_001400193 |
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| Protein GI | 153947809 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 4.5282e-17 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAACGC AAGCAACATC TGTGCGATGG CAATTGTGGA TTGTCGCTTT CGGATTTTTT
ATGCAGACGC TGGATACCAC CATCGTCAAT ACCGCCCTGC CCTCCATCGC AGCCAGTCTG
GGCGAAAATC CGTTACGGAT GCAATCGGTG ATTGTCTCGT ATGTCCTGAC CGTCGCGGTG
ATGTTGCCCG CCAGTGGTTG GCTGGCGGAC CGGATCGGCG TCAAGTGGGT GTTCTTCTCA
GCGATTATTC TGTTCACCTT CGGATCGCTG ATGTGCGCGC AATCAGCAAC ACTGAATGAA
CTGATCCTCT CCCGTGTGCT TCAGGGGGTG GGCGGCGCAA TGATGGTGCC CGTGGGCCGC
CTGACGGTGA TGAAAATCGT GCCACGCGAG CAATATATGG CGGCAATGGC GTTTGTCACA
CTGCCCGGCC AGATTGGGCC ATTAGTTGGC CCGGCGCTGG GCGGGTTTTT AGTGGAATTT
GCCAGTTGGC ACTGGATTTT CCTGATTAAC CTGCCTGTTG GTGTGATCGG CGCATTGGCG
ACCTTGCTGC TCATGCCTAA CCACAAAATG TCTACCCGGC GCTTTGATAT CAGCGGCTTT
ATCATGTTGG CAATCGGTAT GGCGACCTTA ACGCTGGCAC TGGACGGCCA CACGGGACTG
GGGTTGTCGC CGCTGGCCAT TGCGGGGTTG ATCCTGTGTG GCGTAATAGC ACTGGGCAGC
TATTGGTGGC ATGCACTGGG TAATCGTTTC GCACTGTTCT CACTGCACCT GTTCAAGAAT
AAAATCTATA CCCTTGGTTT GGTCGGGAGT ATGTCCGCCC GGATCGGCAG CGGCATGTTG
CCATTTATGA CGCCTATCTT TCTGCAAATC GGCCTAGGGT TTAGCCCATT CCACGCGGGG
CTGATGATGA TCCCGATGAT TATCGGCAGC ATGGGCATGA AGCGGATTAT CGTACAGGTC
GTCAACCGCT TTGGTTACCG GCGAGTCCTG GTCAACGCCA CATTATTACT GGCCGTCGTC
AGCCTGAGCT TACCGCTCGT GGCAATCATG GGTTGGACAC TGCTGATGCC AGTAGTGTTA
TTCTTCCAAG GCATGCTCAA CGCATTACGC TTTTCCACCA TGAATACCTT AACCCTAAAA
ACGTTACCAG ATCGTCTGGC TAGCAGCGGT AACAGCCTAT TGTCGATGGC GATGCAACTG
TCCATGAGTA TCGGGGTCAG TACTGCCGGA ATATTATTGG GTACCTTTGC TCATCATCAG
GTAGCCACCA ACACGCCTGC CACTCACAGC GCGTTCTTAT ACAGTTACTT ATGTATGGCA
ATCATTATCG CCCTACCCGC CCTGATATTT AACCGCGTTC CCCCGGATAC AGGAGCTAAT
CGTCATTTGG CCCGCTAG
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| Protein sequence | MVTQATSVRW QLWIVAFGFF MQTLDTTIVN TALPSIAASL GENPLRMQSV IVSYVLTVAV
MLPASGWLAD RIGVKWVFFS AIILFTFGSL MCAQSATLNE LILSRVLQGV GGAMMVPVGR
LTVMKIVPRE QYMAAMAFVT LPGQIGPLVG PALGGFLVEF ASWHWIFLIN LPVGVIGALA
TLLLMPNHKM STRRFDISGF IMLAIGMATL TLALDGHTGL GLSPLAIAGL ILCGVIALGS
YWWHALGNRF ALFSLHLFKN KIYTLGLVGS MSARIGSGML PFMTPIFLQI GLGFSPFHAG
LMMIPMIIGS MGMKRIIVQV VNRFGYRRVL VNATLLLAVV SLSLPLVAIM GWTLLMPVVL
FFQGMLNALR FSTMNTLTLK TLPDRLASSG NSLLSMAMQL SMSIGVSTAG ILLGTFAHHQ
VATNTPATHS AFLYSYLCMA IIIALPALIF NRVPPDTGAN RHLAR
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