Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1208 |
Symbol | |
ID | 5384394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1418946 |
End bp | 1420340 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640864186 |
Product | U32 family peptidase |
Protein accession | YP_001400189 |
Protein GI | 153949551 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0000479963 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCAT CATCATTTAC AACGGAAAGA CCCTTTACAC CGGAATTGTT ATCCCCCGCC GGTACCCTAA AAAACATGCG ATATGCTTTT GCTTATGGCG CTGATGCAGT CTACGCCGGC CAGCCACGCT ATAGTTTGCG GGTCCGTAAT AATGAATTCA ATCATGAAAA CCTGGCGTTA GGTATTCAAG AAGCCCATGC GCTCGGCAAG CGTTTCTACG TCGTCGTGAA TATTGCCCCG CATAATTCCA AACTGAAAAC CTTTCTGCGC GATTTAAAAC CGGTGATTGA GATGGGGCCG GATGCGCTAA TTATGTCCGA TCCTGGGTTG ATCATGATGG TACGCGACGC TTTCCCACAG ATGGATATTC ACCTGTCAGT GCAAGCCAAC GCCGTCAACT GGGCAACCGT CAAATTCTGG CAGCAAATGG GGCTAACCCG CGTGATACTC TCCCGAGAAT TATCACTGGA AGAAATTGCT GAGATACGGG CTCAAGTGCC CGAAATGGAG CTGGAAGTCT TTGTTCATGG TGCATTGTGC ATGGCCTATT CTGGTCGTTG CCTGCTCTCT GGCTATATTA ATAAACGCGA TCCAAACCAA GGCACCTGCA CCAATGCCTG CCGCTGGGAA TATAACGTTC AAGAAGGGAA AGAGGATGAT ATCGGTAATA TCGTGCACAT CCACCAGCCC ATTGCAGTGA AAAATGTTGA ACCGACGCTG GGTATCGGGG CGCCGACTGA CAAAGTCTTT ATGATCGAAG AAGCACAACG CCCTGGCGAG TACATGACCG CCTCAGAAGA TGAGCACGGC ACTTACATCA TGAACTCAAA AGACCTGCGT GCCATCCAGC ATGTGGAACG CCTAACCCAA CTGGGTGTCC ATTCGCTGAA AATTGAGGGC CGGACAAAAT CGTTTTACTA CTGCGCGCGT ACCGCACAGG TGTATCGCCG TGCTATCGAC GATGCCGTTG CCGGTAAGCC TTTTGACCCC AGTTTGCTGA CCACGCTGGA AGGGTTAGCC CATCGGGGCT ATACCGAGGG TTTTCTGCGC CGCCACGTAC ATGAAGAGCA ACAAACTTAC GAATACGGCT ATTCTGTTTC TGAGCGTCAG CAATTTGTCG GTGAATTCAC TGGCGTGCGC CGCGAGGGTT TAGCTGAAGT GCTGGTGAAA AATAAATTCT CACGGGGTGA TAGCGTAGAG TTGATGACTC CTAAAGGGAA TATCCAATTT ACCCTAGAGA GCATGCAGGA TAAAAAAGGC CAACCCGCCG ATATTGCACC GGGTAATGGG CATATCATGT ATTTACCTAT TCCCGAGGAG ATTGATGTGG AATATGGCTT ACTGATACGT AACTTAAACG GAACAAATAG CCGCAATCCC CACGAAAAAG CGTAA
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Protein sequence | MSSSSFTTER PFTPELLSPA GTLKNMRYAF AYGADAVYAG QPRYSLRVRN NEFNHENLAL GIQEAHALGK RFYVVVNIAP HNSKLKTFLR DLKPVIEMGP DALIMSDPGL IMMVRDAFPQ MDIHLSVQAN AVNWATVKFW QQMGLTRVIL SRELSLEEIA EIRAQVPEME LEVFVHGALC MAYSGRCLLS GYINKRDPNQ GTCTNACRWE YNVQEGKEDD IGNIVHIHQP IAVKNVEPTL GIGAPTDKVF MIEEAQRPGE YMTASEDEHG TYIMNSKDLR AIQHVERLTQ LGVHSLKIEG RTKSFYYCAR TAQVYRRAID DAVAGKPFDP SLLTTLEGLA HRGYTEGFLR RHVHEEQQTY EYGYSVSERQ QFVGEFTGVR REGLAEVLVK NKFSRGDSVE LMTPKGNIQF TLESMQDKKG QPADIAPGNG HIMYLPIPEE IDVEYGLLIR NLNGTNSRNP HEKA
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