Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1200 |
Symbol | |
ID | 5387402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 1411764 |
End bp | 1412645 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640864177 |
Product | hypothetical protein |
Protein accession | YP_001400181 |
Protein GI | 153950441 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.10921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGGATG TTTTAAACGG TAATGTTGGC ATTAACCAGC TAAAACCTCA ACATGAGTAT TTTGATGCTA TAGGGCTAGG AAAGGTATTA AGTGAGAATA CACAATACCA TGCAGTTCTC ACATTAGCAG AAGCCAAAAG TATTATTGAA GATATTAACC CTCCTCGGAC ACAAAGCCCA AGTAACGGAG AAGCACTGGC ACGAGGATTT GAGATAGGAA ATAAGGTTAC TAATCCTGTG GCGCGGGTGT TTTCCGTTAC CGATCCTATT TCTGCTTATG CCGGAAATAT CTACGACTCA CGGGGAGTCT ATGATGTTAT CCGAGAATTT AAGCGATTCA GCATCACCGC GACAGAGTAT GTGGGCGAGA ATGGGCGTAA GTATATTCAC ATTTCTGGCT ATGCCGGCCT TAGGCGTATT ATCACTGGAA CCCGTTATGG TGCCAGCCAC CCACAAATGC TATCAATGGG AATCGGCCAG CAAGGTCTCA GTTCCAATAT TGTTAAAGGT CTAAAGTTCT GTATTCTCTT TTCTATTGGC TATCGAACGA TTGAAGGTAT CTTTAAAGAT GAATATACCT TAGCGGAATT TATCGGCAAT ATAACGATGG ATATGGCTAA AACAGCCATT GTCGCGGCAG TTTCTTTTAT TGTAGGTGTA CTCTTCACTG CGACAGTTCT TGCAGGTGGC AGTATTATTG TCGTTGCTGG GGTAGTTTTT GCCGTTGGCT TTGTAGCTAC CGCTATCCTA GATCATTTCG ATGAAAAGTA TGGTATAAGT GAAAAATTAA TCGCATTATT AACCAAAGAA ATGAGAAAAA AACCAAGAAC ACAAGAAGCA AACTTTCAGT CTATTCTTAA TGGATTAGGG CGACTTAAAT GA
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Protein sequence | MGDVLNGNVG INQLKPQHEY FDAIGLGKVL SENTQYHAVL TLAEAKSIIE DINPPRTQSP SNGEALARGF EIGNKVTNPV ARVFSVTDPI SAYAGNIYDS RGVYDVIREF KRFSITATEY VGENGRKYIH ISGYAGLRRI ITGTRYGASH PQMLSMGIGQ QGLSSNIVKG LKFCILFSIG YRTIEGIFKD EYTLAEFIGN ITMDMAKTAI VAAVSFIVGV LFTATVLAGG SIIVVAGVVF AVGFVATAIL DHFDEKYGIS EKLIALLTKE MRKKPRTQEA NFQSILNGLG RLK
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