| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1187 |
|---|
| Symbol | hisS |
|---|
| ID | 5385959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1398314 |
|---|
| End bp | 1399588 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640864164 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_001400168 |
|---|
| Protein GI | 153949863 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 0.557803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAAGA ACATTCAAGC CATCCGTGGT ATGAACGATT ACCTGCCAGC CGATACGGCA
ATATGGCAGC GTATCGAAAG CATCTTGAAG CAAGTGCTAA GCGGTTACGG TTACAGTGAA
ATCCGTATGC CGATTGTAGA GCAGACCCCG TTATTCAAAC GCGCTATCGG TGAAGTGACC
GATGTGGTTG AAAAAGAGAT GTACACCTTT GATGATCGCA ATGGCGAAAG TCTGACACTG
CGCCCGGAAG GGACTGCAGG CTGTGTGCGC GCGGGTATTG AACATGGTCT GCTGTACAAT
CAGGAACAGC GTCTGTGGTA CATCGGTCCG ATGTTCCGCT ATGAACGTCC GCAAAAAGGT
CGTTATCGTC AGTTCCATCA GTTGGGGGCC GAAGTCTTTG GTCTGCCAGG GCCAGATATT
GATGCCGAGC TGATTTTACT GACAGCCCGC TGGTGGCGTG CATTAGGTAT CTTTGAACAT
GTGAAGTTGG AGCTGAACTC TATTGGTTCG TTGGCTGCCC GTGCTGACTA TCGAGAAGCG
CTGGTGGCGT TCCTGGAGCA ACATGTTGAG GTATTGGACG AAGATTGTAA GCGCCGTATG
TACAGCAATC CGTTGCGGGT GTTAGATTCC AAAAACCCTG ATGTTCAGCA GTTGCTTGAT
GATGCGCCAA AACTGTCTGA TTATCTGGAT GAAGAGTCAA AACAACATTT TGCCGGGTTG
TGTGAACTTT TAGATAAGGC CAGCATCCCA TATACCGTTA ATGAGCGTTT AGTTCGTGGT
TTAGATTATT ACAACCGTAC GGTATTTGAG TGGGTAACGC ACAGCCTGGG CGCACAAGGC
ACAGTCTGTG CGGGTGGGCG TTATGATGGG TTGGTCGAGC AACTCGGTGG TCGTGCAACA
CCGGCCGTGG GTTTTGCGAT GGGCCTTGAG CGCTTGGTTC TGCTGGTGCA GGCTGTTAAT
GCTGATTTCC AGGTGCCTGC GACAGTTGAT GCTTATGTTA TCTCCTCCGG TGAGGGGTCG
CAAAGTGCTG CGATGCTCCT TGCTGAGAGC CTACGTGATG CCTTACCAAC GCTAAAAATA
ATGACCAATT ACGGTGGCGG TAATGTTAAG AAACAATTTA CACGCGCTGA TAAGTGCGGC
GCTCGTGTCG CTTTAATGCT GGGTGAAAGC GAAGTGGCCG CGCAGCAAGT CGTTGTAAAA
GATTTGCGAA ATGGTGAACA AGAAACGCTG GCGCAAGCGG ATGTTGCTGC GCGTCTGGCT
TTGATGTTGG GTTAA
|
|---|
| Protein sequence | MAKNIQAIRG MNDYLPADTA IWQRIESILK QVLSGYGYSE IRMPIVEQTP LFKRAIGEVT
DVVEKEMYTF DDRNGESLTL RPEGTAGCVR AGIEHGLLYN QEQRLWYIGP MFRYERPQKG
RYRQFHQLGA EVFGLPGPDI DAELILLTAR WWRALGIFEH VKLELNSIGS LAARADYREA
LVAFLEQHVE VLDEDCKRRM YSNPLRVLDS KNPDVQQLLD DAPKLSDYLD EESKQHFAGL
CELLDKASIP YTVNERLVRG LDYYNRTVFE WVTHSLGAQG TVCAGGRYDG LVEQLGGRAT
PAVGFAMGLE RLVLLVQAVN ADFQVPATVD AYVISSGEGS QSAAMLLAES LRDALPTLKI
MTNYGGGNVK KQFTRADKCG ARVALMLGES EVAAQQVVVK DLRNGEQETL AQADVAARLA
LMLG
|
|---|
| |