Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1186 |
Symbol | ispG |
ID | 5385400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1396978 |
End bp | 1398105 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640864163 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_001400167 |
Protein GI | 153950353 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.915029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATAACG GATCCCCTAT TATTCGGCGT AAATCGACCC GGATTTACGT CGGTAAAGTG CCTATTGGTG ATGGCGCACC GATTGCTGTG CAATCAATGA CCAATACCAA AACCACGGAT GTGGATGCTA CTGTTGCCCA AATTAAAGCA TTGGAACGTG TTGGTGTGGA TATCGTGCGG GTCTCGATAC CGACAATGGA TGCAGCTGAA GCCTTTAAGT TAATCAAACA GCAGTCTACT GTTCCGCTAG TCGCAGACAT TCATTTTGAT TACCGAATCG CCTTGAAAGT GGCTGAGTAT GGTGTCGATT GTTTGCGGAT CAACCCCGGT AATATTGGTA ATGAATCACG TATTCGTGAA GTTGTTGCCT GTGCACGTGA TTACAATATC CCTATTCGTA TTGGTATCAA TGGCGGCTCG CTGGAAAAAG ATATTCAGGA GAAATATGGT GAACCTACAC CAGAAGCCCT GCTTGAATCC GCGATGCGTC ATGTCGATAT CCTTGATCGT CTCAATTTCG ATCAGTTTAA AGTCAGTGTT AAAGCCTCCG ATGTCTTCCT GGCCGTCAAT TCCTATCGTT TGCTAGCGAA ACAAATTAAT AATCCTCTGC ATTTGGGGAT CACTGAAGCG GGTGGTGCGC GCAGTGGTTC GGTTAAATCT GCGATTGGAT TAGGTTTGCT GTTATCGGAA GGGATTGGCG ATACTTTGCG GATCTCTTTG GCCGCAGATC CAGTAGAAGA AGTGAAAGTA GGCTTCGATA TCCTTAAATC ACTGCGTATT CGTGCGCGTG GGATTAATTT CATCGCTTGC CCAACCTGTT CTCGTCAAGA ATTTGATGTT ATTGGGACGG TGAATGCCTT GGAACAACGG CTGGAAGACC TGATTACACC TATGGATGTT TCTATCATCG GTTGTGTGGT TAATGGTCCG GGAGAAGCGT TGGTGTCGAC AATTGGTGTC ACTGGTGCGC GTAACCACAG TGGTTTTTAC GAAGACGGGG TGCGTCAAAA AGAGCGCTTT GATAACAAAG CCATGATTGA CCAATTGGAA GCAAAAATTC GTGCCAAAGC ATCAATTCTT GATGCGAATA ACCGGATTGT TATCAACCAA TTGGATGATA ATAAATAG
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Protein sequence | MHNGSPIIRR KSTRIYVGKV PIGDGAPIAV QSMTNTKTTD VDATVAQIKA LERVGVDIVR VSIPTMDAAE AFKLIKQQST VPLVADIHFD YRIALKVAEY GVDCLRINPG NIGNESRIRE VVACARDYNI PIRIGINGGS LEKDIQEKYG EPTPEALLES AMRHVDILDR LNFDQFKVSV KASDVFLAVN SYRLLAKQIN NPLHLGITEA GGARSGSVKS AIGLGLLLSE GIGDTLRISL AADPVEEVKV GFDILKSLRI RARGINFIAC PTCSRQEFDV IGTVNALEQR LEDLITPMDV SIIGCVVNGP GEALVSTIGV TGARNHSGFY EDGVRQKERF DNKAMIDQLE AKIRAKASIL DANNRIVINQ LDDNK
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