Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1181 |
Symbol | |
ID | 5387935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1390257 |
End bp | 1392677 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640864158 |
Product | hypothetical protein |
Protein accession | YP_001400162 |
Protein GI | 153947358 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.488758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATATA ATCGTAACCA TATGCTAACG TTAATGTTCT CTTTATTAAT TTTTGATGCC TATGCAAATG AACCCAAAGT CTGCTTTTAT ATGGATGATG ACTATAATGG TGAGTCTCTC TGCGCTGCTC AAGGGAACTC AGTTGCCAAT ATTCCGGATA AATGGAATGA TCGTATATCG TCAATTGCTA TTCCTCATGG TTTAGTTGTC ACTGTCTATA ATGATATAAA CTTCGCGGGT GATTCTCGAT CGTTTGAAGC TGATGTGGAT TTGGTCTTAG ATAAAAATCT GATATATTTA AATGATAATA TAAGTTCATT TAAAATAAAA AAGGCAGTTT GTTTTTATGG CGAAAGTAAC TTTACAGGTG ACTCGGTATG CTTATCTGGT GATGAGCAAT TTGACTTGTA TAGCGGTAGC TATCCTGAAA GGAAACAATC TCATTTGGTA AATCCATTGA ATGATGACGT ATATTCAATA AAAATCCCTC CAGGAATGCA AACTACAGTC TACGAGGACG ATAACTATAA TGGTAAACAC TTTGTTTTGA CAGAGGATTA CACATCTGAT GATTTATTGA TTATAAGAAT GAATAATAAA ATCAGTAGTA TGCGTGTTTC TCAAGATGAG GATTTCATTT GTGATCGTTT CTGTTCTATA AAAAAATCAA TTAAATTTAA AATACAAAAA AGTTTTGGAT CCTATTGGCT TGATCCACGA ATAAAACACA GGGATATATT AGTCGACTTT CAGTTGTCTG ACACCGATGA TTATTCAATA AAATTTTTCG ATGAGGGTCT TATAAAAGTT AAAGATTATA AATTATTTTT CTTTGATGGT AATAAAAAAT ATGGTGAGGG TTTTTTATTT AATTTAGATA ACAAAAGCAG TAATTTGTCA TTTTTATTGC GTTTTAATGG TGGTTTTTTT CAAATTCAAT TTGTTGAATC ATTAAATAAT GAAATTGTTT ATTCTTCTCC TTTGATTGGA ACATTATTTG ATGATGTTAA CTCAAATGTT ATTTTTGATA TTAATAATGT AGATGCAAAT AGCCCAATAG TTATCGATAA AATGGTATTA ACCGTTGGTA AGGAGCATAA CCGGGCTGAA CGTAGTACTC TGGGTCTAGC GACTTGTTGG ACAATACCCA TACTGAGTAT TTATAACTAT ATTGTTCAGG GGCATTGTAA TCAGGCAGAT AAGTTTGTCC ATAATGCTGC CGATTTTTTT GGTAGCCCGG CAGATAAAAT ATTGCAAATA TTTGGTTCCT CTTTACCCTT GCCTAAAAAA AATAGCAATG AAACATTAGA TGACGAATCT GCATTAATTA ATTTTATGTC TGATGTGAAA GGGACGTTAA CCTATATTAC GACCAATATG GGCGAACACG CATTAACCGT ACCGGCAACG GCACTCGCGT GCAAAGCCTC AATGCGAGAG AAAATCCTGC CTCATCTGCG TAGCCGACGT GATCTTGCGC CAGGGTGTAT CGATTGGACT TTGAGTATTT TAACCGATTT TACCTTGTTG TTTGGTGCCA GCATTGAGTA TTGGAATAGC AAAAATTTTG GGCGAGTAAT CGAAAATATT GTTCGCGAAG GGGAGATTGG TTCTGCTGTG GCAGATGTGG AGACGGCATC ACGTTTAGTC GAGTCAGTTC AGGCCCATGT GGCTGAAGCG ACAGAGGTTG CAGATATCAT TCATCTCAAA ACGGCATTCG ATTTTTCCCA GCTAAGTTAT GTTAATTATT TACGCCATAC TGAAGAGGAA GTGATACCGC CACAAAGCGC GCAGACGCTA CCCTTAGGGC GTTATGAACT GGCACTGGTA GATTACCATT TTATCGAGAC GGTACCCAGG ATTCGTCAGG ATGGCCGTTG GGTAGAACGC CCAGATCTGC ATTTTGATAT TGAAGTGATT AGCGGGGTTC CCGAAGAGAC TAATGCGAGC CGGCAAGTGC TTTTGCCGAT TATCGAAGCG TGGCAGCATA GCTATCGTCA ACAAGAATTA CTTTTTCAAT CCTCTGAAAT TCCTCCAGAA AGTGCCTTGG CTCGGAATGA AATTGAGCCG TTGTTAGAGG CTTCACGACT GACTAGCGAA GTTGCAACCA GTTGGTTAAG GACTAGCCGT GATGATTTTG TTTACGTCGT AGTCCGTTTG GAGGGCGAGG TTATTAGCCT CACCATGGCA GTCGATATCA ATACTAATGA TGTGGGGGTT GCCGGGTCAT TAACCAACCC AGATTATGTA CTGACACCTA ATGCGGAAGG GGCCGTCAGA GGCGCGGGTA CGGCGGCGAC CCGAGCATTG GCTGACCACT TTAAACGCAA AGGGAAAATA TCCTTGGTCT CTTCTGTGAT CAGTCAGCCA TCCGCGATTG TGAAGAAAAA AGTGGGCTTT AGATTTATTG AAGAGCTCTA A
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Protein sequence | MRYNRNHMLT LMFSLLIFDA YANEPKVCFY MDDDYNGESL CAAQGNSVAN IPDKWNDRIS SIAIPHGLVV TVYNDINFAG DSRSFEADVD LVLDKNLIYL NDNISSFKIK KAVCFYGESN FTGDSVCLSG DEQFDLYSGS YPERKQSHLV NPLNDDVYSI KIPPGMQTTV YEDDNYNGKH FVLTEDYTSD DLLIIRMNNK ISSMRVSQDE DFICDRFCSI KKSIKFKIQK SFGSYWLDPR IKHRDILVDF QLSDTDDYSI KFFDEGLIKV KDYKLFFFDG NKKYGEGFLF NLDNKSSNLS FLLRFNGGFF QIQFVESLNN EIVYSSPLIG TLFDDVNSNV IFDINNVDAN SPIVIDKMVL TVGKEHNRAE RSTLGLATCW TIPILSIYNY IVQGHCNQAD KFVHNAADFF GSPADKILQI FGSSLPLPKK NSNETLDDES ALINFMSDVK GTLTYITTNM GEHALTVPAT ALACKASMRE KILPHLRSRR DLAPGCIDWT LSILTDFTLL FGASIEYWNS KNFGRVIENI VREGEIGSAV ADVETASRLV ESVQAHVAEA TEVADIIHLK TAFDFSQLSY VNYLRHTEEE VIPPQSAQTL PLGRYELALV DYHFIETVPR IRQDGRWVER PDLHFDIEVI SGVPEETNAS RQVLLPIIEA WQHSYRQQEL LFQSSEIPPE SALARNEIEP LLEASRLTSE VATSWLRTSR DDFVYVVVRL EGEVISLTMA VDINTNDVGV AGSLTNPDYV LTPNAEGAVR GAGTAATRAL ADHFKRKGKI SLVSSVISQP SAIVKKKVGF RFIEEL
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