| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1176 |
|---|
| Symbol | sseB |
|---|
| ID | 5386318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1379818 |
|---|
| End bp | 1380735 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640864153 |
|---|
| Product | enhanced serine sensitivity protein SseB |
|---|
| Protein accession | YP_001400157 |
|---|
| Protein GI | 153950372 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTC CGCCCCCATC TGTTGATGAT AAACATGCTG TTGATGATAG CCCGGCTGCT
GATGAGCGTC ACGAACACCA CCATCATGAC GAACATGGCG AGGATCTGGA ATCTTTGCTG
AAACTGGCCG CCACCGCGTC TATTCATCGC ACGGCGTTTT TCCGCGTGTT GTTGGATGCC
ACGGTCTTGG TACTGGTAGG GGATTCAGAG CAGGGCAGTG ATGATGGCGA AATGAGTTTC
ACCACCGCTA ACGGGGTGAA TATTTTGCAT TGGGAAAAGC AAGATGGTGA GTCTGTCATT
CCTTTTTTCA CCTCGGTAGA GGTCTTGCAG CAGGCCTTGG AACAAACTGA TGGCGAGACC
ATCGGCAGTG AAAAGCAGCC TTTCGTCGCG ATGCCGGTGC GGGTGTTATT TGAAATGACA
CAAGGCGCAC ATCTGTTTTT GAACCCAAAA TCTGAATATG GCAAAGAGTT CTGGCCGGAA
GAAGTGGCGA TGCTGTTGAA GAACGGCGGG TTGGTGCAAC CCGCTGAAAT GGTGGTAGAT
AAAGAGAGCC AAATTTTACT GGGCCAACCC GAGGAGTATC CCTCCGCGAT GGTGGATGCA
CTGATCCAAT TGTTTAGTCA GCGTAAACCG GTGCGGCGGG CTTTTTTGGC GCTGATGCAT
GATAAAAGTG TTGATGAAAA ACCCAACCTG TTGATTGGTC TGGAAGTGGA TGGCACCGCT
AATGAAGTAG ATCAGTTGAT CCAAGAGGCC GGTAATGTGG CCAGTGATCA CGCCCCAGAC
GGCGGCCCGG TAGATTTTTG CCTGGTCAGT GAAAAAGAGC GAGGGGTCAG CCACTATCTC
ACCACCCATA CGCAGGCGTT TTATCAACGC AAATGGGGCA GTTGGTTGAG AAATGTTATT
CCTTCGACGA ACCACTGA
|
|---|
| Protein sequence | MSFPPPSVDD KHAVDDSPAA DERHEHHHHD EHGEDLESLL KLAATASIHR TAFFRVLLDA
TVLVLVGDSE QGSDDGEMSF TTANGVNILH WEKQDGESVI PFFTSVEVLQ QALEQTDGET
IGSEKQPFVA MPVRVLFEMT QGAHLFLNPK SEYGKEFWPE EVAMLLKNGG LVQPAEMVVD
KESQILLGQP EEYPSAMVDA LIQLFSQRKP VRRAFLALMH DKSVDEKPNL LIGLEVDGTA
NEVDQLIQEA GNVASDHAPD GGPVDFCLVS EKERGVSHYL TTHTQAFYQR KWGSWLRNVI
PSTNH
|
|---|
| |